Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0642 ATGCAAGGCATCATTTCTGACAGAGATTTGAGAATGTCTAGCAGAAGATCTCGTTCCAGAGAGATCAGTGATGCCCAGATCAACGACCTCGTCTCCAAGTTACAACGCCTTATTCCCGAGCTTCAATCCCCTCGCTCCCACAAGGTATCAGCGGCGAAGGTGTTGAAGGAGACATGCAACTACATAAAGAAGTTGCACAGAGAAGTGGATGATCTGAGTGACCGATTATCTGAGCTTTTGTCCACTACCGACTCCGACAGTGCGGAAGCTGCCATTCTTAGGAGCTTACTTCTGGTGTCGGTTGCCTTGAGAAGTGGTGGAGTGGCTTTGTTGGGCAGTGATAGTAATGGTGGTGTTGGAGTTCTAGTTGGGAAATTGAGGTCTGGCAATGACGCCTGCACTGCTTATGTGACATTCAGAGATGCTTATTCTCAAGAAACAGCCTGCTTGCTCAGTGTGAGTTTTGGCCAAATTCTTTTTTGGGATGCTGAGGAAACTACTTCAACTCACCCTCAAAGCAATGATTTTGTGTCATCCGCTGGAGAAGCAGTTACTGTGGCACAAGATGTTGTCAAGACCATGCTAGCAAAGGGATATGTTCTTGGTAAGGACGCATTAGCCAATGCCAAAGCTTTCGATGAGTCTCACCAAGTTTCAGCAACTGCCTCAGCAAAGGTTGCTGAGCTGAACCAGAGAATTGGCCTCACCGAGAAAATATCTGCCGGCGTCAATGCTGTTAGGTCCGTGGATCAGAGATATCATGTCTCAGAAACAGCCATGTCAGCCGCATCAGCAACGGGAAGAACAGTCGCAGCAGCAGCAAATACCATGGTAAATAGCAGCTATTTTTCAAAGGGAGCCTTGTGGATGTCAGGTCTATTATCCCGAGCCGCAGATGCAGCGGCTGATCTGGGTAGAGCCGCAGATTCATCAGCTGATCCGGGTAGCCGCGTTGGTGCGGGTAGTAGGCAGTGA 975 0.4882 MQGIISDRDLRMSSRRSRSREISDAQINDLVSKLQRLIPELQSPRSHKVSAAKVLKETCNYIKKLHREVDDLSDRLSELLSTTDSDSAEAAILRSLLLVSVALRSGGVALLGSDSNGGVGVLVGKLRSGNDACTAYVTFRDAYSQETACLLSVSFGQILFWDAEETTSTHPQSNDFVSSAGEAVTVAQDVVKTMLAKGYVLGKDALANAKAFDESHQVSATASAKVAELNQRIGLTEKISAGVNAVRSVDQRYHVSETAMSAASATGRTVAAAANTMVNSSYFSKGALWMSGLLSRAADAAADLGRAADSSADPGSRVGAGSRQ 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0642 324 Pfam Helix-loop-helix DNA-binding domain 26 65 IPR011598 GO:0046983
Lele55g0642 324 MobiDBLite consensus disorder prediction 304 324 - -
Lele55g0642 324 Coils Coil 62 82 - -
Lele55g0642 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 26 81 IPR036638 GO:0046983
Lele55g0642 324 CDD bHLH_AtPRE_like 22 82 - -
Lele55g0642 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 11 65 IPR011598 GO:0046983
Lele55g0642 324 Gene3D - 16 94 IPR036638 GO:0046983
Lele55g0642 324 PANTHER TRANSCRIPTION FACTOR PRE 12 97 IPR044293 GO:0006355|GO:0040008|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0642 Lele-ChrLele55 4228694 4235354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0642 12 98 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 61.290 2.57e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele55g0642 HLH 2.6e-06 No_clan