Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0638 ATGAGGAAGCTGAAGCAGCAGCAGCAGCGGCAGCTGGGTAAAGAAGAAGAATCTCAGAAGAAGGAGCGTCATATTGTGACGTGGACACAAGAGGAAGATGATATCTTGCGAAAGCAGATAAGCATCCATGGAACTGAGAATTGGGCAATTATTGCATCTAACTTCAAAGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTACTTGAACTCTGATTTCAAGAAAGGAGGATGGTCACCGGAGGAAGACTTGCTCTTATGTGAGGCTCAGAAAATATTTGGTAACAGATGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAATGCTGTGAAAAACCGTTTCTCCACCCTGTGCAAGAAGAGAGCAAAATTTGAAGCCTTGGCAAAAGAGAATAACACTTCGTTCACTAATTCAAACAACAAAAGAACTATTTTCCAACAGGGTGACAGTAGAGAGTTAACATCAGAGGCTGCAGCACCACCTGCTAAGAAGATGAGGAGAGCCCATATCCCTGATGCTGCAGAAAGGATCAACTATGGAGACAGATCCCATAAGCAATATGAAGCAACAATGAAACAGCAGCCAAGAGCGCCATTTTTGATTTTGGCTCAGACCTTGCCACATCAGCATGAAGCCTCTAATGACAAGATCAGCAGTAATGCCAATAATTGCAAGACTCAAGGAACATTTCTTAAAGAAGATGATCCAAAGATAAGTCTGTTGATGCAACAACAAGAGTTATTAAGCTCACTAACTCTAAAAGTTAATACAGATGATGTGGACCAGAGTCTTGAAGATGCATGGAAGGTGCTTCAAGAGTTTCTGAGCCAAACCAAAGAATCAGATATTCTCAAACATAAGATTTCGGATTTACAGCTCGTAGATCTTAAATACTTGATGGAGGAGTTTAAGAGTAGTAATGAGGGAAGCCAGCAATGTTGGAGGCAACCAGAACTATATGAAGACTCTCCAAGCAGTTCTGAATACAGTACAGGATCAACTCTTCTGCCCCATTCAGCAAGTGATAACCTGGAACACTCTCTGCTTCAGGATATTGGAACTGATCTAAAGCCTATCCAACTTGGAGATAAAAAAGGAGTTAGTGAATGTGGGAAAGAGGATTTCTCTTCTGCAACTATTGGTCAAGTAGCAGATATCTTTCCATCTTGTGAGGAACAGATAAGCAATGAAGGCATTGTTTCTACCTCATCAAGCACAGAGTTCAATTCCCCTCTTCAAGTTACCCCTATGTTCAGATCTTTGGCTGCAGGAATTCCCAGCCCACAGTTTTCAGAAAGTGAAAGGCACTTCCTAATGAAAACGCTTGGATTGGAGTCCCCTTCCATGAACCCAAGTTCCAACCCCTCACAACCACCACCCTGCAAAAGAGCCCTACTACAAAGTCTATAA 1422 0.4226 MRKLKQQQQRQLGKEEESQKKERHIVTWTQEEDDILRKQISIHGTENWAIIASNFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDLLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKFEALAKENNTSFTNSNNKRTIFQQGDSRELTSEAAAPPAKKMRRAHIPDAAERINYGDRSHKQYEATMKQQPRAPFLILAQTLPHQHEASNDKISSNANNCKTQGTFLKEDDPKISLLMQQQELLSSLTLKVNTDDVDQSLEDAWKVLQEFLSQTKESDILKHKISDLQLVDLKYLMEEFKSSNEGSQQCWRQPELYEDSPSSSEYSTGSTLLPHSASDNLEHSLLQDIGTDLKPIQLGDKKGVSECGKEDFSSATIGQVADIFPSCEEQISNEGIVSTSSSTEFNSPLQVTPMFRSLAAGIPSPQFSESERHFLMKTLGLESPSMNPSSNPSQPPPCKRALLQSL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0638 473 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Lele55g0638 473 Pfam Myb-like DNA-binding domain 28 87 - -
Lele55g0638 473 MobiDBLite consensus disorder prediction 1 23 - -
Lele55g0638 473 FunFam Transcription factor MYB124 20 76 - -
Lele55g0638 473 CDD SANT 80 121 IPR001005 -
Lele55g0638 473 SUPERFAMILY Homeodomain-like 24 118 IPR009057 -
Lele55g0638 473 SMART sant 24 73 IPR001005 -
Lele55g0638 473 SMART sant 76 124 IPR001005 -
Lele55g0638 473 MobiDBLite consensus disorder prediction 8 23 - -
Lele55g0638 473 PANTHER MYB PROTEIN-RELATED 27 200 - -
Lele55g0638 473 MobiDBLite consensus disorder prediction 315 338 - -
Lele55g0638 473 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Lele55g0638 473 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 71 IPR017930 -
Lele55g0638 473 Gene3D - 15 76 - -
Lele55g0638 473 ProSiteProfiles Myb-like domain profile. 28 71 IPR001005 -
Lele55g0638 473 Gene3D - 79 152 - -
Lele55g0638 473 MobiDBLite consensus disorder prediction 446 473 - -
Lele55g0638 473 CDD SANT 27 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0638 Lele-ChrLele55 4190063 4194881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0638 16 319 MYB Transcription Factor Family AT2G02820 61.661 3.17e-133 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele55g0638 Myb_DNA-bind_6 4.9e-15 CL0123