Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0635 ATGAATTCTCTGCATCATCCCAAACAACCCGACAATAACATAGTTCTTCATTCTCCTAATAATGGTGCAGGAACACATGCCCACGTGGGAAGACCATGGATTCTCAATGAACAGAAGAATCTGTTTGTTGTTTCAAACAATCACAGAGGAAGGGGGAAGAGAGATGATAAGAAGAAGAAATATATAGGTGATCCGAGGGATTTGCATGCTCTGAAAGTAGACAAGGGAATAAGATTTCAAACTCGTAAGCTGAAGAAGTTCTCATATAAGGTCTTAGAAGATGCCACACGCAGGTTCAGCACTAAGAACTTGATTGGGCAGGGAGGTTTTGCTGATGTTTATAAGGGATATGTCTCCCACTACACCATGAATGCTGCAAAACCACATGAAGGATTCCCCATTGCTGTTAAGAGAATCAGAAGACTTGGATCACGAGGACACGAAGAATGGCTGAATGAAGTGATATATTTGAGCAAAATTAGCCATCCAAACGTGGTGAATCTCATTGGGTATTGCCGTGAGGGTCAGCATCGAATGCTTGTGATTGAGTACATGATTGAAGGAAGCTTGGAGGACCATCTCTCGAAAGAAGACAGAGGAAAGCTGAACTGGAACAGAAGAATTAACATAGCACTTGGGGCTGCAAGGGGTTTAGAGTATCTTCACATATATGAAACACCAGTAATTCATCGTGATGTTAAATCTTCAAATATCCTGCTAGATGCTAATTTCAATGCAAAGCTCTCAGACTTCGGACTGGCTAGAGATGGACCTGAAGATGACCAGTCCCATGTATCCACAAGAATCCTTGGCACTAGAGGCTACTTTCCCCCTGAGTACATAGCCACAGGGCATTTAACTCTGAAAGCTGATGTTTATAGCTTTGGGGTGGTTCTACTAGAGATATTATCAGGCTCTGGTGCAGTTAGGAAACATTCAGACGGGGTAGTGGGGAATCTTGCCCAGTGGGCTGAACCATTTCTAAGTAACAAATTGGAACTTCACCGAGTTATAGACAAGAAATTAGGACAAAGTTTTCCCATGGAAGGAGCCTATGATTTGGCTCAACTAATACTAAATTGCCTCAGCTTAAACCCCAAGCATCGCCCAATAATGGCTGAAGTTGTGGCTGCCTTGGAACAGATAGAACTAAACTTAGACTTTCTTTATAAGAGAATGTATAGTAGAAGAACCAGAACTCATTCTTATTCTCACTCTTAA 1221 0.4193 MNSLHHPKQPDNNIVLHSPNNGAGTHAHVGRPWILNEQKNLFVVSNNHRGRGKRDDKKKKYIGDPRDLHALKVDKGIRFQTRKLKKFSYKVLEDATRRFSTKNLIGQGGFADVYKGYVSHYTMNAAKPHEGFPIAVKRIRRLGSRGHEEWLNEVIYLSKISHPNVVNLIGYCREGQHRMLVIEYMIEGSLEDHLSKEDRGKLNWNRRINIALGAARGLEYLHIYETPVIHRDVKSSNILLDANFNAKLSDFGLARDGPEDDQSHVSTRILGTRGYFPPEYIATGHLTLKADVYSFGVVLLEILSGSGAVRKHSDGVVGNLAQWAEPFLSNKLELHRVIDKKLGQSFPMEGAYDLAQLILNCLSLNPKHRPIMAEVVAALEQIELNLDFLYKRMYSRRTRTHSYSHS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0635 406 SUPERFAMILY Protein kinase-like (PK-like) 81 383 IPR011009 -
Lele55g0635 406 FunFam PTI1-like tyrosine-protein kinase 3 185 390 - -
Lele55g0635 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Lele55g0635 406 ProSitePatterns Protein kinases ATP-binding region signature. 105 137 IPR017441 GO:0005524
Lele55g0635 406 Pfam Protein tyrosine and serine/threonine kinase 101 379 IPR001245 GO:0004672|GO:0006468
Lele55g0635 406 PANTHER OS01G0588500 PROTEIN-RELATED 63 383 - -
Lele55g0635 406 Gene3D Phosphorylase Kinase; domain 1 79 184 - -
Lele55g0635 406 ProSiteProfiles Protein kinase domain profile. 99 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0635 406 SMART serkin_6 99 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0635 406 Gene3D Transferase(Phosphotransferase) domain 1 185 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0635 Lele-ChrLele55 4170589 4173316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0635 85 379 Glycoside Hydrolase AT3G07070 46.309 8.57e-82 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele55g0635 PK_Tyr_Ser-Thr 2.1e-51 CL0016