Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0632 ATGGGAAAGACACCTGGAAAATGGATCAAGGCCTTACTTTCGGGGAAGAAATCAAAGTCTCATTCATCAAAAAAGAAGGATTCCTTTAAGCCTTTAAGTACCAAGGACTTGCTGGCAGTGTCCTCCGAAATGCATGTGTCTGATCCAATTGCGGTTCCTGCACTGATATCCCAACCCATTTCTGGAGCTACTGCAACTAAGGAATCAGTTTCTGAAAAGGTCTTAGTCGGTGAATTGTCAAACGACAGGGTTGTTATCTCGGCTAGAGATGAAGAGACCAGGGCACAAGCTGTTACTGGTTTTGGTTCAGAGGATGATCCTGAGAAAATCAGGCTTAACCAAGCTGCTATAAAAGCTCAGGCTGCTTTTAGGGGTTATCAGGCTCGGCGGGAATTTCAAACACTCAAAGGTATCATACAGCTGCAAGCTCTTATTCGAGGCAACTTGGTCAGGAAAGAAACAGTTGCTACTTTATACTGTGTGAATGGAATAGTTAAGTTTCAAGCATTGGTTCGTGGTTACAAGGTTAGGCGTTCTGATATTGGTCTTGCAGTGAATAAAATTTGCAAGGGTACTAAGTCTTTAATTGCTGTTGGAGAATCAACATCGACGCAGACAGAAAAGCGGTCCAAAAGTGTCTTTGTTAACAAGCTTCTGGCTTCATCATCCTTTGTCTCTCCTCGATGTATCAACTATGATCCTGAACAACGTAATTTGGCTTCAGACTGGCTTGATCGTTGGACAAGTTCTCTCTTCTGGGCACCTCTTCTGGGCCTGGAATCAAAAACAACACATGACTCAGTGTCTAACGAGAAAAATTGCAACAGTCAAACAGTTGAAAAGAATGGCGGTCGAGTTAAAAGAAATGCCCGGAAAAGTTCTGGCATAAAAGTTAATGATGGTTCAGCCTCAGATTCAAACGAAAATAAACACCGTCCAAAAAGGGTTTCAGCTCACCCATTGCATTCAGGCCAAGAAAATACACGGAAGGAAGTTGAGAAAAGTAGTTTAAGAAAACCACTCAAGCAGAATGTTTCTGATAGATCTGAGATTGTTAATGGGAAAGGAAAAGGCATACCAAGAAAAGTATCTGGTCATAGTGCCACTGATGTTTCAGAGAATGAACCAAATGTTTCTGCAGAAAAAATGAAAGATTCAGCCATGGTAAAATCCAAACATTCTGATCATGAGCAAAGCCCCATACAACAAGCACAAGATGAACGTGATTCTCCCATAGCTAACTTGCCGTCTGGATTGAGGAACAGTAAAGACAATGGTATTCAAGGAGTCAATGAGGACTTGAACTGCATTGACAGTGTGAGCCCTAAGAATTGCCCGAGAAGAGCTTCACTGCCTGCAAAGTTTGACAGTCAAGACGACGGTGTGCAAAAAACTCCGAGACTGCCCAGCTACATGGCCCCTACTGAATCTGCAAAAGCTAGGGTAAGAGGTCAAGGCTCCCCTAGGCTTGTTAGTGACTTGGTAGAAAAAAATGGTGCAACCCGGCGGCATTCACTTTCATCTTCAGTCAATGGCAAGTTAGGTTCATTTTCTCCACGAGCAGAAAGACTGGGAGCTTTGAGCAGCAAGGGAGTAATAAGAACTGATAAATCTCTGTCATCTTCAAGGGATGGGAGTGAAGTTGATCCAACCTCAGTGGAGAAGGTGATGTTACATAATACTTGA 1686 0.4294 MGKTPGKWIKALLSGKKSKSHSSKKKDSFKPLSTKDLLAVSSEMHVSDPIAVPALISQPISGATATKESVSEKVLVGELSNDRVVISARDEETRAQAVTGFGSEDDPEKIRLNQAAIKAQAAFRGYQARREFQTLKGIIQLQALIRGNLVRKETVATLYCVNGIVKFQALVRGYKVRRSDIGLAVNKICKGTKSLIAVGESTSTQTEKRSKSVFVNKLLASSSFVSPRCINYDPEQRNLASDWLDRWTSSLFWAPLLGLESKTTHDSVSNEKNCNSQTVEKNGGRVKRNARKSSGIKVNDGSASDSNENKHRPKRVSAHPLHSGQENTRKEVEKSSLRKPLKQNVSDRSEIVNGKGKGIPRKVSGHSATDVSENEPNVSAEKMKDSAMVKSKHSDHEQSPIQQAQDERDSPIANLPSGLRNSKDNGIQGVNEDLNCIDSVSPKNCPRRASLPAKFDSQDDGVQKTPRLPSYMAPTESAKARVRGQGSPRLVSDLVEKNGATRRHSLSSSVNGKLGSFSPRAERLGALSSKGVIRTDKSLSSSRDGSEVDPTSVEKVMLHNT 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0632 561 SMART iq_5 159 181 IPR000048 GO:0005515
Lele55g0632 561 SMART iq_5 134 155 IPR000048 GO:0005515
Lele55g0632 561 SMART iq_5 111 133 IPR000048 GO:0005515
Lele55g0632 561 Pfam Protein of unknown function (DUF4005) 457 532 IPR025064 -
Lele55g0632 561 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Lele55g0632 561 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Lele55g0632 561 MobiDBLite consensus disorder prediction 264 283 - -
Lele55g0632 561 MobiDBLite consensus disorder prediction 533 547 - -
Lele55g0632 561 MobiDBLite consensus disorder prediction 450 561 - -
Lele55g0632 561 MobiDBLite consensus disorder prediction 501 515 - -
Lele55g0632 561 Pfam IQ calmodulin-binding motif 114 133 IPR000048 GO:0005515
Lele55g0632 561 Pfam IQ calmodulin-binding motif 136 153 IPR000048 GO:0005515
Lele55g0632 561 Pfam IQ calmodulin-binding motif 164 178 IPR000048 GO:0005515
Lele55g0632 561 PANTHER IQ-DOMAIN 5-RELATED 1 508 - -
Lele55g0632 561 MobiDBLite consensus disorder prediction 324 345 - -
Lele55g0632 561 MobiDBLite consensus disorder prediction 404 427 - -
Lele55g0632 561 MobiDBLite consensus disorder prediction 377 403 - -
Lele55g0632 561 Gene3D - 109 158 - -
Lele55g0632 561 MobiDBLite consensus disorder prediction 264 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0632 Lele-ChrLele55 4146682 4150366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0632 1 544 IQD Protein Family AT1G14380 36.968 7.73e-85 273