Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0626 ATGGAGGTAGCCTCTGTGAAATGTGAACTGAGCCCAACAGGCCATAGGTCTTACATGATGGGTGGTGGTGACAGTGATGTTAGTAAGTGTGGCAAAAGGAGGCGAAGAGATTCTTCTTTGGCCATCTTAGAAGCCAATGCACAGCCACAGGGCAACCGATCAACCACCACCACCGTAAAGAGAAGCTCGAGGTTTCGGGGAGTTAGCAGACATAGGTGGACAGGAAGGTATGAGGCTCACCTATGGGATAAAGGAACATGGAATCCAACTCAGAAGAAGAAAGGGAAGCAAGGGGCTTATACTGATGAAGAAGCGGCTGCTAGAGCTTATGATTTAGCTGCACTAAAGTACTGGGGAACTTCAACTTTCACAAATTTCCCTGTGTCTGAGTATGAGAACGAAATTGGGATCATGAAAACTGTAACTAAAGAAGAATACCTTGCTTCATTAAGAAGGAGAAGCAGTGGTTTTTCTAGAGGTGTATCAAAGTACAGAGGAGTAGCAAGGCACCATCACAATGGCAGATGGGAAGCAAGGATAGGGAGAGTATTTGGCAACAAGTACCTCTACCTTGGGACTTATAGTGAGTTTCTCCCTCTTAGGCTTTGTTTGGATTCACGTACACAAGAAGAGGCTGCTCGCGCATACGACATCGCAGCAATTGAGTACAGAGGCATAAATGCAGTGACAAATTTTGACTTGAGCACATACATCGGATGGCTAAGACCTGAAGCACCTTCTTCTTCTTTACTAGTGGGAAATCCAAGCAAAGATCTTCAGAACATGACAACCTCAAACCTTGTCCAAACACAAGGAACTACTGAGGTATCCAACTTCATCCTCAATCCATTCCCTACTGGTGATTCTGATAGTACAGAGAAGCAAGGAAGTTCAAAATACATGAGCTCTCTAAGTGCTTGCAATGGAAGTTCAAAATACATGAGCTCTCTAAGTGCTTGCAATAATAACAAGTCATCTTCCCCAACAGCACTAGGGATTCTCATGAAATCCTCAGTATTTAGTGAGCTGATGCAGAAGAATCTGAATTCTGCTAATGAAGAATCAGAAGAGAGTGAATTGAAAATCCCACAAGAAGGCAGTGATGGGTTTGGAGTGGCTTTTGATCATGAAATTGCAAGTAACTCTTTCTTATGCCCTTCCAATAATAATAGCAGATTTTTCGTGGAGTCACCAGAAGAAAGCACGTGGCCATGGTATCATAGAACCGCGCAATCCCCATGGAGTGGTGCTTTAAACTGA 1260 0.4373 MEVASVKCELSPTGHRSYMMGGGDSDVSKCGKRRRRDSSLAILEANAQPQGNRSTTTTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYTDEEAAARAYDLAALKYWGTSTFTNFPVSEYENEIGIMKTVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSEFLPLRLCLDSRTQEEAARAYDIAAIEYRGINAVTNFDLSTYIGWLRPEAPSSSLLVGNPSKDLQNMTTSNLVQTQGTTEVSNFILNPFPTGDSDSTEKQGSSKYMSSLSACNGSSKYMSSLSACNNNKSSSPTALGILMKSSVFSELMQKNLNSANEESEESELKIPQEGSDGFGVAFDHEIASNSFLCPSNNNSRFFVESPEESTWPWYHRTAQSPWSGALN 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0626 419 Pfam AP2 domain 63 119 IPR001471 GO:0003700|GO:0006355
Lele55g0626 419 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 46 315 - -
Lele55g0626 419 CDD AP2 162 235 IPR001471 GO:0003700|GO:0006355
Lele55g0626 419 ProSiteProfiles AP2/ERF domain profile. 64 127 IPR001471 GO:0003700|GO:0006355
Lele55g0626 419 ProSiteProfiles AP2/ERF domain profile. 163 233 IPR001471 GO:0003700|GO:0006355
Lele55g0626 419 Gene3D AP2/ERF domain 162 235 IPR036955 GO:0003700|GO:0006355
Lele55g0626 419 Gene3D AP2/ERF domain 63 129 IPR036955 GO:0003700|GO:0006355
Lele55g0626 419 SUPERFAMILY DNA-binding domain 162 235 IPR016177 GO:0003677
Lele55g0626 419 MobiDBLite consensus disorder prediction 46 65 - -
Lele55g0626 419 SMART rav1_2 163 239 IPR001471 GO:0003700|GO:0006355
Lele55g0626 419 SMART rav1_2 64 133 IPR001471 GO:0003700|GO:0006355
Lele55g0626 419 Coils Coil 341 361 - -
Lele55g0626 419 SUPERFAMILY DNA-binding domain 63 129 IPR016177 GO:0003677
Lele55g0626 419 MobiDBLite consensus disorder prediction 46 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0626 Lele-ChrLele55 4093961 4096723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0626 21 280 AP2-EREBP Transcription Factor Family AT5G57390 50.000 1.77e-78 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele55g0626 AP2 2e-07 CL0081