Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0612 ATGGCCATGGCTGCTCCTAATAAGAATTTTTCTTCTTCCTCAATTCTCACTGCTTTTCTTCAACACGAAAGCCTTCCTTCTTCTTCTTCTCTTGGCTCTTTCTTGCTTCACCACTCTGACCCCTCCTTCCAAGGTTCAAAACCTCTGGTTGATTTCGAGAATGTTAGAGGAAGCACAGTCACAGAATTGCCATTCTACCAACAAGCTCTGGAGGACAAAGAAGACAACAACACAGAAGAGGAATACGATGCGTGCTTTCATCATCAACCAGCTGGGAAGAAGAGGAGGCTCACAGGCGAACAAGTTCAATTCCTTGAGAAGAACTTCGAGGCAGAAAACAAGCTCGACCCAGAAAGAAAAGTTCAACTCGCTAAAGAACTCGGATTACAGCCAAGACAAGTCTCAATTTGGTTCCAGAACCGAAGAGCTCGGTTCAAAACCAAACAGCTCGAAAAAGACTACACCACCTTAAAATCTGGCTATGACAAACTCAAAGCTGAATATGACAGTCTTCTTCACCAGAATGACAAGTTGAAAGAAGAGGTGAATTCTCTGAAGAACAAGTTGATGGGGAGAGATCATCATAAAGAGAAAGAAGAGAATTATGACAAGTGTTTTGATGTTTTGATCTCGGACAATAATAATGGGGTTTCTGAAAATGGGTCAAAAGTTGAAAAGGTTCCTACAGTAATATGCAAAAAAGAAGATGCCAATTCTGCTAAAAGTGATGTGTTTGATTCAGATAGCCCACACCACACTGCAGATTCGTCCCATGCCGAATTCGAAACAGAGCACTCGGATTTCTCACAGGACGAAGAAGATCACAATCTCTTGAGTGATCTCCCATGTTTACCAAAGGTTGAAGAAGGGCCCTGTAACTTTGGATTGTTCCCATTTGATCAAGATCAACCCTTCTGTTTTTGGTCTTATTAA 933 0.418 MAMAAPNKNFSSSSILTAFLQHESLPSSSSLGSFLLHHSDPSFQGSKPLVDFENVRGSTVTELPFYQQALEDKEDNNTEEEYDACFHHQPAGKKRRLTGEQVQFLEKNFEAENKLDPERKVQLAKELGLQPRQVSIWFQNRRARFKTKQLEKDYTTLKSGYDKLKAEYDSLLHQNDKLKEEVNSLKNKLMGRDHHKEKEENYDKCFDVLISDNNNGVSENGSKVEKVPTVICKKEDANSAKSDVFDSDSPHHTADSSHAEFETEHSDFSQDEEDHNLLSDLPCLPKVEEGPCNFGLFPFDQDQPFCFWSY 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0612 310 FunFam homeobox-leucine zipper protein ATHB-6-like 96 142 - -
Lele55g0612 310 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 68 250 IPR045224 GO:0003700
Lele55g0612 310 ProSiteProfiles 'Homeobox' domain profile. 88 148 IPR001356 GO:0003677
Lele55g0612 310 PRINTS Lambda-repressor HTH signature 119 128 IPR000047 GO:0003677
Lele55g0612 310 PRINTS Lambda-repressor HTH signature 128 144 IPR000047 GO:0003677
Lele55g0612 310 Coils Coil 147 188 - -
Lele55g0612 310 SMART HOX_1 91 152 IPR001356 GO:0003677
Lele55g0612 310 Pfam Homeodomain 93 146 IPR001356 GO:0003677
Lele55g0612 310 ProSitePatterns 'Homeobox' domain signature. 123 146 IPR017970 GO:0000981|GO:0006355
Lele55g0612 310 CDD homeodomain 93 149 IPR001356 GO:0003677
Lele55g0612 310 MobiDBLite consensus disorder prediction 241 274 - -
Lele55g0612 310 SUPERFAMILY Homeodomain-like 85 150 IPR009057 -
Lele55g0612 310 Gene3D - 87 155 - -
Lele55g0612 310 Pfam Homeobox associated leucine zipper 148 189 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0612 Lele-ChrLele55 3992465 3993684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0612 93 192 Homeobox Transcription Factor Family AT3G01470 70.000 2.27e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele55g0612 Homeodomain 3.1e-17 CL0123