Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0593 ATGTCTCCTCCCTCAACCTTTCCCTTCCCCATCATCGTCCTCTTCTTCTTCATTTCGCAGCTTGCTTCTGCTCACACTTGCTCTTCACGTCCACAAACGTCGTCGTCTTCATCTTCATCTTCCTCTTCTCTTTGCCCACCATTCACTTCAAATCCTCCTTTTCCATTCTCTTTCTCGCCAGGCTGTGGCCACCCTTCCTTCCAAATTCAATGCTCCACTCCTAATTCTACCATCACCATTAACCGCATAACTTTTTCTGTTCTTAGTTATAACCCCAATTCCTCTTCTCTCACCCTCTTTCCTTATATTGATAATGCATCTGAAGCAGCAAGTTCAGCCGCCCACAGAAATTGCTCCACCCCTCACTTGCTTTCCATTCTCAATTCTTCTATTGATCTCTCTGGCTCTCCCTTCAGAATCTCCGATGCACTCTGTTCCCGCCTCTTTGATATCCCACCTTGCTCGCCGCCCACTCTACCAAACTGTAGCCATTGTCCATGGGAATGTAGCCTAATCAAGAACCCAGCTTACCTCCTCCGTGACTGCAGATCTGCCCACCGTCACTCCGTTTCAGACGTAGAGGGCCGCTGCGAAAGTGACGTTTTGGGTTATCTCGACCACATACTTGCTCGAGGGATCGAAGTCGAGTGGGATGAAGCTCAAGATCCTTACTTTTCTAGCTGCAGAAACTGCAGCGCAAACAAGGGAGTTTGTGGATTCAATTCATCAGACCCACATAATCAATTTATGTGCCTTCGCTCCAAATCTGAATCTAGTTTCTCACCTGGTTGGATTGGAAGGGTGAATCCCAAGCGTAATACGGTTTTGTCGCTTGTCATCCCTTCGATGTTGTTGATTCTTTTTGTTTCTGTGGCCACTGCAATTTTCCGCTCGAGGAGATTCAAGTCATCGAAGACAGAGGACCCAACGATCCTTTTTCTTCACACCCAGCGCTGTGCTAGCCTTCTTCCTCCTGTTTTCACCTACGAGGAATTGGAGGCGGCGACAAATCGGTTCGACCCGAAACGCAAAATTGGCGATGGTGGGTTCGGGTCGGTGTACTTGGGTCATCTCCATGATAGCAGAATCGTTGCCGTGAAGTACCTCCATAAGCACCACGCGGAGGCCGCCGCGGGACGAGCTTTTTCCACCAAGTCCTTCTGCAATGAAATTTTGATTCTTTCTTCGATCGACCACCCGAATCTAGTCAAGCTCCACGGGTTTAGCAGCGATCCGAGAGGATTGCTTCTGGTCTACGACTATGTCCCCAATGGAACTCTCGCGGATCATCTTCATGGCCCCAAGAGTTCATTCGGAAAAGGGTGTCTGACGTGGCAAGTGAGGCTCGATATTGCTCTGCAAACAGCATTGGCCATGGAGTACCTTCACTGCTCTGTTGTGCCGCCGATAGTTCACAGAGACATCACTTCGTCGAACATCTTCTTGGAGAGAGACATGAGGATTAAAGTTGGAGACTTTGGGCTGTCTAGGCTATTGGTTTTGCAGGATACGTCATCGTCTTCAACTGGGTATGTCTGGACGGGCCCCCAAGGTACACCTGGATACTTGGATCCGGATTACCACCGGTCGTTCCGGTTAACGGAGAAGAGTGACGTCTATAGCTTTGGGGTGGTGTTGCTGGAGCTTATTTCTGGGTTGAAGGCTGTGGATCAGAGCAGGGACAAGCGGGAAGTCGCGTTGGCCGATCTGGTGGTCTCCAGAATCCATACGGGTCAGCTTAATCAGGTGGTGGACCCAATTTTGGCGAAGGAGGAAGTAATGGACGCCGTCGCCGTGGTGGCGGAGCTGGCGTTCCGTTGCGTGGCGGCGGACAAGGACGACCGCCCGGACTCGAAAGAAGTGGTGGAGGAGCTGAAGCGGGTAAGGAGTCGGAACCAGGCGGCACTCCGATCGTCGTCGAATGCCCCTGCCGGTGCTGCTGAGGTGGCGAAGAACTATGAAGCGAGGGATTGTGGATCGTGA 1983 0.5119 MSPPSTFPFPIIVLFFFISQLASAHTCSSRPQTSSSSSSSSSSLCPPFTSNPPFPFSFSPGCGHPSFQIQCSTPNSTITINRITFSVLSYNPNSSSLTLFPYIDNASEAASSAAHRNCSTPHLLSILNSSIDLSGSPFRISDALCSRLFDIPPCSPPTLPNCSHCPWECSLIKNPAYLLRDCRSAHRHSVSDVEGRCESDVLGYLDHILARGIEVEWDEAQDPYFSSCRNCSANKGVCGFNSSDPHNQFMCLRSKSESSFSPGWIGRVNPKRNTVLSLVIPSMLLILFVSVATAIFRSRRFKSSKTEDPTILFLHTQRCASLLPPVFTYEELEAATNRFDPKRKIGDGGFGSVYLGHLHDSRIVAVKYLHKHHAEAAAGRAFSTKSFCNEILILSSIDHPNLVKLHGFSSDPRGLLLVYDYVPNGTLADHLHGPKSSFGKGCLTWQVRLDIALQTALAMEYLHCSVVPPIVHRDITSSNIFLERDMRIKVGDFGLSRLLVLQDTSSSSTGYVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRDKREVALADLVVSRIHTGQLNQVVDPILAKEEVMDAVAVVAELAFRCVAADKDDRPDSKEVVEELKRVRSRNQAALRSSSNAPAGAAEVAKNYEARDCGS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0593 660 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Lele55g0593 660 Gene3D Phosphorylase Kinase; domain 1 315 421 - -
Lele55g0593 660 ProSiteProfiles Protein kinase domain profile. 339 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0593 660 CDD STKc_IRAK 345 627 - -
Lele55g0593 660 Pfam Protein kinase domain 341 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0593 660 ProSitePatterns Tyrosine protein kinases specific active-site signature. 470 482 IPR008266 GO:0004672|GO:0006468
Lele55g0593 660 Gene3D Transferase(Phosphotransferase) domain 1 422 651 - -
Lele55g0593 660 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 422 639 - -
Lele55g0593 660 FunFam Putative serine/threonine-protein kinase At1g18390 family 315 421 - -
Lele55g0593 660 Pfam Wall-associated receptor kinase C-terminal 179 253 IPR032872 -
Lele55g0593 660 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 633 IPR044652 GO:0004672
Lele55g0593 660 MobiDBLite consensus disorder prediction 632 660 - -
Lele55g0593 660 SUPERFAMILY Protein kinase-like (PK-like) 324 627 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0593 Lele-ChrLele55 3865206 3867188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0593 45 635 Receptor kinase-like Gene Family AT1G69910 62.092 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele55g0593 Pkinase 7.4e-42 CL0016