Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0589 ATGTCGAAGGGAGAGGAAGCAGTGAAGCTTCTGGGTGCATGGGCGAGTCCCTTTGTGATGAGTTATCGCATTGCTCTGACCATTAAGTCAGTGAGTTATGAGTTCCTTCAAGAGAATTTGGGATCCAAGAGCGAGCTTTTGCTTCAGTCCAATCCTGTTCACAAGAAAGTCCCAGTTCTCATTCATGGCGATAAGACTATTTGTGAGTCTCTCATTATTGTCGAGTATGTCGACCAAGTCTGGTCTTCTGGCCCTTCTATTCTTCCTCCTCATCCCCACGATCGTGCCGTTGCTCGTTTCTGGGCTGCCTATCTTGACGACAGGTGGTTCCCTGCAATGAAATCCGTGGGTGCTGCAAAAGGAGACGAAGAGAGGAAGGCTTCTATACAGCAATTAGAAGAAGGATTCGCATTAATGGAGAGTGCTTATCACAGCATTAGCAAAGGCAAGCCCTTCTTTGGTGGTGACCGGGTCGGGTATCTGGATATTGCTTTGGGGTGCTTCCTCGGGTGGCTGCGGGTCACCGAGTCATTTGCCGGGTTCAAATTGTTGGACCACACCAAGACACCGGGTCTGGCCCAATGGGCTGAAAGATTCTGTGCTGATGAAGCTGTGAAGCATGTAATGCCTGAAACTGACAAGCTTCGCGAGTTCGCCAAGAAGCTTATGGCAAAAATGGCATCAAACTATTTCTCCATCTTGGTGATGGCGGGGAGTAGTGAGCTGAAGCTTCTGGGGAGATGGTCGAGCCCTTTTTCGATGAGGGCGACGATTGCTCTGAACATCAAATCTCTTGAATATGAACACTTGGAAGAACACTTCAACCCTAAGAGCGATCTTCTTCTTCAGTCCAACCCAGTCTACACCCTAGTCCCAGTTCTTCTCCACCATGGCAAACCCATCTGTGAATCCCTCATTATAGTCCAATACATCCACGAGACTTGGCCCTCTGGCCCCTCCATCCTCCCCTCCGATGCGTATGATCGCTCACTCGCTCGATTCTGGGCTGCTTACATCGACGACAAGTGGTTTCCTTCAATGGAAAACATTATGACTGTGGAAGATGAGGAGTCAAGGAAGCCGTACTATGAGACAATGGACGAGGTGGTTGGGAGGATAGAGGATGCGTTTGGGAAAATCAGCGAAGGAAAACCGTTTTTTGGCGGAGACCAGATTGGATTCATTGACATTGTTTTCGGAAGTACACTGGGTTGGCTCAGTGTTGTAGAAACTTTATATGGACGAAAGTTTCTTGTTGAAGCCAAAGCTCCATCTTTGGTGAAATGGGCTGAGAGATTTGCTGCTGATCCTTCTGTGAATGGTCTCATACCTGAAACTGATAAACTCATAGAGCTTGCCAAGGTCCTTCAGATCAAATGGAGAGCTGCCGCAATTACCAACAAGTAG 1407 0.4819 MSKGEEAVKLLGAWASPFVMSYRIALTIKSVSYEFLQENLGSKSELLLQSNPVHKKVPVLIHGDKTICESLIIVEYVDQVWSSGPSILPPHPHDRAVARFWAAYLDDRWFPAMKSVGAAKGDEERKASIQQLEEGFALMESAYHSISKGKPFFGGDRVGYLDIALGCFLGWLRVTESFAGFKLLDHTKTPGLAQWAERFCADEAVKHVMPETDKLREFAKKLMAKMASNYFSILVMAGSSELKLLGRWSSPFSMRATIALNIKSLEYEHLEEHFNPKSDLLLQSNPVYTLVPVLLHHGKPICESLIIVQYIHETWPSGPSILPSDAYDRSLARFWAAYIDDKWFPSMENIMTVEDEESRKPYYETMDEVVGRIEDAFGKISEGKPFFGGDQIGFIDIVFGSTLGWLSVVETLYGRKFLVEAKAPSLVKWAERFAADPSVNGLIPETDKLIELAKVLQIKWRAAAITNK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0589 468 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Lele55g0589 468 Pfam Glutathione S-transferase, N-terminal domain 241 312 IPR004045 -
Lele55g0589 468 CDD GST_N_Tau 8 81 - -
Lele55g0589 468 Pfam Glutathione S-transferase, C-terminal domain 101 202 IPR004046 -
Lele55g0589 468 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 215 IPR045073 -
Lele55g0589 468 Gene3D - 322 464 - -
Lele55g0589 468 Gene3D - 88 230 - -
Lele55g0589 468 CDD GST_C_Tau 92 222 IPR045074 GO:0004364|GO:0006749
Lele55g0589 468 CDD GST_N_Tau 242 315 - -
Lele55g0589 468 FunFam Glutathione S-transferase GSTU6 237 322 - -
Lele55g0589 468 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 325 456 IPR010987 -
Lele55g0589 468 FunFam Glutathione S-transferase U9 88 229 - -
Lele55g0589 468 CDD GST_C_Tau 326 456 IPR045074 GO:0004364|GO:0006749
Lele55g0589 468 FunFam Glutathione S-transferase U9 322 463 - -
Lele55g0589 468 SFLD Main.3: Omega- and Tau-like 5 229 IPR045073 -
Lele55g0589 468 SFLD Main.3: Omega- and Tau-like 239 462 IPR045073 -
Lele55g0589 468 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 240 319 IPR004045 -
Lele55g0589 468 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 222 IPR010987 -
Lele55g0589 468 SFLD Glutathione Transferase (cytosolic) 5 229 IPR040079 -
Lele55g0589 468 FunFam Glutathione S-transferase GSTU6 3 88 - -
Lele55g0589 468 SUPERFAMILY Thioredoxin-like 8 110 IPR036249 -
Lele55g0589 468 SFLD Main (cytGST) 239 462 - -
Lele55g0589 468 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lele55g0589 468 SUPERFAMILY Thioredoxin-like 242 344 IPR036249 -
Lele55g0589 468 SUPERFAMILY GST C-terminal domain-like 80 225 IPR036282 -
Lele55g0589 468 Gene3D Glutaredoxin 236 321 - -
Lele55g0589 468 Gene3D Glutaredoxin 1 87 - -
Lele55g0589 468 Pfam Glutathione S-transferase, C-terminal domain 363 432 - -
Lele55g0589 468 SUPERFAMILY GST C-terminal domain-like 313 456 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0589 Lele-ChrLele55 3846671 3850404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0589 238 454 Glutathione S-transferase Gene Family AT1G10370 55.046 5.56e-78 241