Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0583 ATGAGTACTCGCGCGGTACTTATTGTTGTTGACAAGTTCTTTGAAATTCATATGTGCGATGCACTTCTGCGCAACACCAATCAGGTTAAGCAGGATGGATTTTTTCCAGCAGATCTGCTTTTCCTGGCCAGTTCAAATGCAGATGGTGTCTGCTACATTGAGACTACAGCCTTTTACTTTGTGTTTGGGCTACAGACTGCTAATTTGGATGGGGAAACCAATCTCAAGATCAGGAAAGCTTTGGAGAAGACTTGGGATTACATGACTCCAGAGAAGGCATCTGAGTTTCAAGGGTATATTGTTGGAGCAGTTATTTTCACGGGGCATGAAACAAAGGTGATGATGAATTCCATGAATGTGCCTTCTAAAAGAAGTACATTGGAGAGGAAGCTTGACAAACTCATACTCGCTCTATTTTCAACTCTCTTCGGAATTTGTGTTATTGGAGCCATAGGCAGTGGCATCTTTGTAAACAACAAATATTTCTATTTACGCCTTGATGTAGGAGGCGAGGACTCAGCACTGTTCAACCCAAATAACAGATTTATGGTTATTGTCCTGACTTTATTTACCCTCATCACTCTGTATTCACCTCTCATCCCTATTTCACTGTATGTGTCAATAGAGATGATCAAATTTATTCAGTCTACTCAATTTATCAACAAGGACCTGTGCATGTACCATAAGGAAACCAATACCCCAGCATTGGCCAGGACATCTAATCTAAATGAAGAACTTGGGCAGGTGGAATACATATTCTCTGACAAAACAGGAACTTTAACAAGAAACTTAATGGAGTTTTTTAAGTGTTCAATTGGAGAACAGGTCTATGGAACTGGTGTTACTGAAATTGAGAGGCAAATAGCAGAGCGTAATGGGATGAAAATTGAGGTGGTACATTTTTTTCACGGAATGAGAGTAATTGTTCTGCTAAAGAGATCAAAGTTACGCAGCATCAATCTTTCTCTACAGGAAAATAAATCAAGCACTGCAGTGCAAGAGAGGGGCTTTAATTTTGATGATGATAGGCTTATGCAAGGAGCTTGGAGGAAGGAGCCTAATCCTAACATTTGTAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTTCCTGAGGGCGATGAGTCCCCAGATAAAATCACGTATCAAGCAGCCTCACCTGATGAGGATGCTTTGGTCATTGCTGCAAAGTGCTTTGGTTTCTTCTTTTACAGGAAGCGCCAATCTGTTATATGCCGTTATCCAGATGGGAAGCTTGTATTATACTGTAAGGGTGCTGATACAGTAATCTACGAGAGACTCGCCGATGGCAATGAAGATATAAAGAAATTGACCAGGGAGTATTTGGAACAATTTGGAGCTGCTGGGTTGCGTACATTATGCCTGGCCTACAAAGAATTACATACTCATGCATATGAAAGTTGGAATGAGAAGTTCATACAGGCCAAGTCTTCTCTAAGTGATCGTGACAAGAAGTTGGATGAGGTACACTTTTATCATTCATACTCTGTGGGTTGTCTTTACATTGGTCAAATTTTCACCAAGGTGGCAGAACTTATAGAAACTGATCTGATTTTGATTGGTAGCACTGCCATAGAGGACAAGCTTCAAAAGGGAGTTCCATCATGTATAGAGACTCTCCAAAGAGCTGGCATTAAAATTTGGGTGCTTACTGGAGACAAGATTGAAACAGCAATAAATATAGCCTATGCATGCAATTTGATATCCAATGAGATGAAAAAGTTTATTATCAGCTCAGAAACTGATGCAATTAAAGAAGTTGAAGAAAGGGGTGACCCAGTGGAAATCATGCATTTGATTAGAGAAGAAGTGAAGAAAGGGTTGAAGCAGTCCCTTGAGGAAGCACAGAGCTATCTTCAATCTCTTAATGGACAAAAATTAGCACTTGTAATTGATGGGAAAAGTCTAACGCATGCATTAGACCCAAGTTTAAGAGTGATGCTTCTGAATTTGGGTTTGAATTGTCACACGGTCGTTTGCTGTCGAGTTTCTCCTTTACAAAAAGCACAGGTCACAAGGCTAGTCAAAAAATGTGCACATAAAATAACATTAAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGATGGAGGGAATGCAAGCAGTGATGGCCAGTGATTTCTCCATTGCGCAGTTTCGTTTCCTTTCTGATTTACTGCTTGTCCATGGCCGGTGGTCATACCTTAGAATATGCAAGGTTATTACATACTTCTTCTATAAAAATCTCACATTCACTCTCACTCAGTTCTGGTTTACCTTTCAAACGGGGTTTTCTGGTCAGAGGTTCTATGATGATTGGTTTCAGTCATTATATAATGTTATCTTCACGGCACTGCCTGTGATTGTCGTTGGACTATTCGACAAGGGAAACACATACCATTTGCCTATATTTTGTGCAAAAAATTCAGCAGGCAAAACATTTGGACAGTGGGATGTCAGTACAATGGCCTATACATGTGTTATTGTAACTGTCAATTTACGACTACTTATGATCTGTAATTCGGTCACAAGATGGCACTTAATTGGTGTTGGTGGAAGTATATTAGCATGGTTTGTATTCGTCTTCGTATATTCAGTGGTCAGACTGGAGAATGTATATTTTGTGATATATGTCATAATGAGCACACTCTATTTCTATGTCACGCTTCTTCTTGTTCCCATTGCTGCCCTCTTGGGTGACTTTGTCTACCAAGGGATTCACAGATGGTTCTTTCCCTATGATTATCAGATTATTCAGGAAATTCACAGAGACGAACCGGATAGCGGCAATAGGACACAGCTACTGGAGGTGGGGAGTCATTTGACGCCATCAGAGGCGAGGAGCTATGCCATGTCTCAACTGCCTCGTGAGGTATCAAGGCACACAGGTTTTGCTTTTGATTCACCTGGCTACGAGTCCTTTTTCGCTTCACAGTTTGGTGTCTGTGTGCCGCAAAAGGCATGGGATGTTGCTAGACGAGCTAGCAGGTTTCGAGCACCAAAGATAGGAGGCCACAAAAAATAG 3066 0.4097 MSTRAVLIVVDKFFEIHMCDALLRNTNQVKQDGFFPADLLFLASSNADGVCYIETTAFYFVFGLQTANLDGETNLKIRKALEKTWDYMTPEKASEFQGYIVGAVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILALFSTLFGICVIGAIGSGIFVNNKYFYLRLDVGGEDSALFNPNNRFMVIVLTLFTLITLYSPLIPISLYVSIEMIKFIQSTQFINKDLCMYHKETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGEQVYGTGVTEIERQIAERNGMKIEVVHFFHGMRVIVLLKRSKLRSINLSLQENKSSTAVQERGFNFDDDRLMQGAWRKEPNPNICKEFFRCLAICHTVLPEGDESPDKITYQAASPDEDALVIAAKCFGFFFYRKRQSVICRYPDGKLVLYCKGADTVIYERLADGNEDIKKLTREYLEQFGAAGLRTLCLAYKELHTHAYESWNEKFIQAKSSLSDRDKKLDEVHFYHSYSVGCLYIGQIFTKVAELIETDLILIGSTAIEDKLQKGVPSCIETLQRAGIKIWVLTGDKIETAINIAYACNLISNEMKKFIISSETDAIKEVEERGDPVEIMHLIREEVKKGLKQSLEEAQSYLQSLNGQKLALVIDGKSLTHALDPSLRVMLLNLGLNCHTVVCCRVSPLQKAQVTRLVKKCAHKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFSIAQFRFLSDLLLVHGRWSYLRICKVITYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIVVGLFDKGNTYHLPIFCAKNSAGKTFGQWDVSTMAYTCVIVTVNLRLLMICNSVTRWHLIGVGGSILAWFVFVFVYSVVRLENVYFVIYVIMSTLYFYVTLLLVPIAALLGDFVYQGIHRWFFPYDYQIIQEIHRDEPDSGNRTQLLEVGSHLTPSEARSYAMSQLPREVSRHTGFAFDSPGYESFFASQFGVCVPQKAWDVARRASRFRAPKIGGHKK 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0583 1021 SUPERFAMILY Calcium ATPase, transmembrane domain M 73 926 IPR023298 -
Lele55g0583 1021 FunFam Phospholipid-transporting ATPase 528 735 - -
Lele55g0583 1021 CDD P-type_ATPase_APLT_Dnf-like 29 809 - -
Lele55g0583 1021 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 407 809 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele55g0583 1021 PRINTS P-type cation-transporting ATPase superfamily signature 695 714 - -
Lele55g0583 1021 PRINTS P-type cation-transporting ATPase superfamily signature 253 267 - -
Lele55g0583 1021 SFLD p-type atpase 235 746 IPR044492 -
Lele55g0583 1021 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 330 473 IPR023299 GO:0000166
Lele55g0583 1021 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 668 774 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele55g0583 1021 ProSitePatterns E1-E2 ATPases phosphorylation site. 255 261 IPR018303 -
Lele55g0583 1021 Gene3D - 525 735 IPR023214 -
Lele55g0583 1021 Gene3D - 365 485 IPR023299 GO:0000166
Lele55g0583 1021 Pfam Phospholipid-translocating P-type ATPase C-terminal 723 809 IPR032630 -
Lele55g0583 1021 Pfam Phospholipid-translocating P-type ATPase C-terminal 815 926 IPR032630 -
Lele55g0583 1021 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 814 972 - -
Lele55g0583 1021 SUPERFAMILY HAD-like 241 738 IPR036412 -
Lele55g0583 1021 FunFam Phospholipid-transporting ATPase IC 250 262 - -
Lele55g0583 1021 SFLD Haloacid Dehalogenase 235 746 - -
Lele55g0583 1021 Coils Coil 614 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0583 Lele-ChrLele55 3803566 3813333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0583 28 1016 Primary Pumps ATPases AT1G59820 62.691 0.0 1390