Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0574 ATGATGCCTCGCACGTGCTCACAGCGCGGTACCACCGGCCACAACTCCCGACCATGCACCGACGGCAACAACGACTCCGGCGAGAACAGTATCTTACTCTTCGGGGTGCGAGTCACGCAAGGGAACTCGTTCAGGAAGAGCGCTAGCATGACCGATCTATCACAGTACCAGCAGCCGCTGCCTCAGGATTTCAACGCCGACGCCGGTTACGCCTCCGATGATGTCGTTCACGCTTCCGGTCGTAGCCGCGAAAGAAAGAGAGGTGTTCCATGGACGGAGGAGGAGCATAGGCTATTCCTGCTCGGGCTTCAACAGGTAGGGAAAGGTGATTGGAGAGGGATTTCTAGAAACTTCGTGAAAACGCGCACACCAACTCAGGTAGCCAGTCATGCTCAGAAGTACTTCCTCCGCCGGCATAACCATAACCAGAGACGTCGGAGATCTAGTCTGTTTGATATCACCACCAACACGGTGACAGAATCCTCATCTACAGCAACAGTGGAAGCAGGGGGAGTCCATCAAGAAGGAGTACCGCCGAAATATCCCCATTACGGCAGTGGCTTTGGCGGCTCATCATTTCAGACGTCACTGGGGAAAGTTCATGTGGCTGAATCTATGCCGGCCAGCAAGGAGAAGTCGTCGATGGCATTCCAAGTGATGTCAGGAAAGCTGAGCGGTGGTGGTAATAGCAATAGCATGATCAGTGTTGCTTGA 714 0.5406 MMPRTCSQRGTTGHNSRPCTDGNNDSGENSILLFGVRVTQGNSFRKSASMTDLSQYQQPLPQDFNADAGYASDDVVHASGRSRERKRGVPWTEEEHRLFLLGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNHNQRRRRSSLFDITTNTVTESSSTATVEAGGVHQEGVPPKYPHYGSGFGGSSFQTSLGKVHVAESMPASKEKSSMAFQVMSGKLSGGGNSNSMISVA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0574 237 Pfam Myb-like DNA-binding domain 90 135 IPR001005 -
Lele55g0574 237 FunFam transcription factor MYB1R1 89 140 - -
Lele55g0574 237 ProSiteProfiles SANT domain profile. 86 139 IPR017884 -
Lele55g0574 237 SUPERFAMILY Homeodomain-like 85 138 IPR009057 -
Lele55g0574 237 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 86 137 IPR006447 GO:0003677
Lele55g0574 237 SMART sant 87 137 IPR001005 -
Lele55g0574 237 PANTHER TRANSCRIPTION FACTOR KUA1 3 192 - -
Lele55g0574 237 Gene3D - 89 140 - -
Lele55g0574 237 MobiDBLite consensus disorder prediction 1 25 - -
Lele55g0574 237 ProSiteProfiles Myb-like domain profile. 83 135 IPR001005 -
Lele55g0574 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 139 IPR017930 -
Lele55g0574 237 CDD SANT 90 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0574 Lele-ChrLele55 3756717 3757721 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele55g0574 Myb_DNA-binding 1.1e-10 CL0123