Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0524 ATGAAGATGTGCAGTCACATTTCCTCACTAGTGGCCATGGCATCAAGATCATATGCTAATCTCCTAGACTTAGCAAGTGGAGACTTATTGGCTAATCCTCACACCCCAAGAACTCTTCCAAGGATTGTTACAGTTCCAGGAATTATTTCAGATCTGGATCGTCAAGGTTCTAATGATGGGGATTCAGATGTCAGCTCTTCTGGCTGTCGAGAGCGGAAAATTATTGTGGCAAACATGCTACCATTGCAGGCTAAAAGGGACCCACAAACTTCTAAATGGTGCTTTAGTTTGGATGAGGATTCACTTTTATTACAGCTGAAAGATGGGTTTTCTTCTGATACTGAGGTGATCTATGTGGGGTCCCTCAAGGTTGAAATAGAGTCCAGCGAGCAGGAAGAAGTTGCTCAGAAATTAATGGACATCTTCAATTGCGTGCCTACTTTTCTACCTCATGATCTCCAGAAAAAGTTTTATCTTGGTTTTTGTAAGCAGCAGCTGTGGCCTCTCTTTCATTATATGCTACCTATGTGCCCAGATCATGGTGATCGCTTTGACCGCACGCTTTGGCAGGCTTATGTTTCTGCTAACAAAATATTTGCGGATAAGGTTATGGAAATAATTAATCCTGATGATGATTTTGTGTGGGTTCATGACTATCACTTGATGGTGTTGCCTACTTTTCTGAGGAAGAGATTTAATCGAGTTAAACTTGGTTTCTTCCTTCATAGTCCTTTCCCTTCATCTGAAATTTACCGAACCTTGCCAGTACGAGATGAAATTCTCAGGGGATTGTTGAATTCTGACTTAATTGGTTTTCACACATTTGATTATGCTCGCCACTTTCTCTCTTGCTGCAGTAGAATGCTGGGTCTGGACTATGAATCTAAACGGGGACATATAGGACTTGATTATTTTGGCCGCACTATATTTATCAAGATTTTGCCTGTAGGCATTCACATTGGTAGGCTTGAATCCGTTTTAGATCTTGCTTCTACGTCTTCTAAAATAAAAGAAATCCAGGAAGAGTTTAAGGGTAGGAGAGTGATTCTTGGTGTTGATGATATGGATATTTTCAAGGGCATCAGCTTGAAACTACTAGCACTAGAGCAGCTGCTGCATCAGCATCCTGATTTGTTGGGCAAAATTGTACTAGTTCAAATTGTGAATCCTGCTAGGGGTTCTGGGAAGGATGTTCAGGAAGCAAAGAAGGAAACATATTTAATTGCCCAGAGGATCAATGATACTTATGGTTCACCTCATTATAAACCTGTTATTCTCATCCATCGTCCTGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTATAGCAGAATGTTGTATTGTCAATGCTGTGAGGGATGGCATGAACTTGGTCCCTTACAAATACGTTGTCTGCAGACAAGGAACTTCAAAACTGGATCAAGCATTGGGTAGAAAAAATGATGCTCCTCGTACAAGCATGCTTGTTGTATCAGAATTTATTGGCTGTTCACCTTCCTTGAGTGGAGCAATTAGGGTTAACCCCTGGGATATAGATGCTGTTGCTGAAGCTTTGAATTTGGCCATTACAATGCATGATTCAGAGAAGAAATTGCGGCATGAGAAGCACTATCGGTATGTCAACTCCCATGATGTGGCTTATTGGGCACGCAGTTTTATGCTGGATTTGGAGAGAGCATGCAAAGATCATTACACCAAAAGGTGCTGGGGAATTGGTCTAGGCCTAGGGTTCAGAGTTGTTTCTCTTAATCCCGGTTTTAGGAAGTTGTCTGTTGATCACATTGTTTCAGCATACAAGAGAACCAAAAGAAGGACCATATTTCTTGATTATGATGGTACTGTTGTACCAAAATCTTCCATAAATAAAATCCCCAGCCCTGAAGTCATATCTGTTTTGAATACTTTGTGTAATGATCCCAAGAACACCGTGTTCATTGTTAGTGGGAGGGCAAGAGATTCATTGAGTGATTGGTTTGCTTCATGCAAATTGCTGGGACTTGCTGCTGAACATGGGTACTTCTTAAGGTGGAGCAGTTCCTCCCAATGGGAAACAAGTAACCTGCGTGCTGACCTTGATTGGAAAAATGTCGTGGAACCCTTAATGAGGCTATACATAGAAGCAACTGATGGATCTAATATTGAAATTAAGGAAAGTGCATTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCCAAAGAATTGTTAAATCACCTTGAAAGCGTGCTTGCTAATGAACCGGCTGTTGTTAAGAGGGGGCAACATATTGTTGAAGTTAAGCCACAGGGAGTAAGCAAGGGTTTGGTAGCTGAAAAGGTTCTTATGACTATGGTCAATGATGGGGATCCGCCAGATTTTGTTTTGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAGAGCATACTAAGGACAATCTCTTGCCCATCATTGCTAGTTGCTCCAGAGATCTTTGCCTGCACCGTGGGCCAGAAGCCTAGCAAGGCCAAGTATTATCTTGACGATGCTGCTGATGTGGTAAAATTGCTTCAGGGCCTTGGTACTTCATCAAATCCAAAGCCTAGGCATTTAGCCCATTTCCAGGTTTCTTTTGAGAGCACAGTTTGA 2622 0.4184 MKMCSHISSLVAMASRSYANLLDLASGDLLANPHTPRTLPRIVTVPGIISDLDRQGSNDGDSDVSSSGCRERKIIVANMLPLQAKRDPQTSKWCFSLDEDSLLLQLKDGFSSDTEVIYVGSLKVEIESSEQEEVAQKLMDIFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRTLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHIGRLESVLDLASTSSKIKEIQEEFKGRRVILGVDDMDIFKGISLKLLALEQLLHQHPDLLGKIVLVQIVNPARGSGKDVQEAKKETYLIAQRINDTYGSPHYKPVILIHRPVPRFEKSAYYAIAECCIVNAVRDGMNLVPYKYVVCRQGTSKLDQALGRKNDAPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVAEALNLAITMHDSEKKLRHEKHYRYVNSHDVAYWARSFMLDLERACKDHYTKRCWGIGLGLGFRVVSLNPGFRKLSVDHIVSAYKRTKRRTIFLDYDGTVVPKSSINKIPSPEVISVLNTLCNDPKNTVFIVSGRARDSLSDWFASCKLLGLAAEHGYFLRWSSSSQWETSNLRADLDWKNVVEPLMRLYIEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLNHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLMTMVNDGDPPDFVLCIGDDRSDEDMFESILRTISCPSLLVAPEIFACTVGQKPSKAKYYLDDAADVVKLLQGLGTSSNPKPRHLAHFQVSFESTV 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0524 873 Pfam Glycosyltransferase family 20 72 557 IPR001830 GO:0003824|GO:0005992
Lele55g0524 873 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 72 561 - -
Lele55g0524 873 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 606 806 IPR006379 -
Lele55g0524 873 Gene3D Glycogen Phosphorylase B; 66 326 - -
Lele55g0524 873 TIGRFAM T6PP: trehalose-phosphatase 602 850 IPR003337 GO:0003824|GO:0005992
Lele55g0524 873 CDD GT20_TPS 72 557 IPR001830 GO:0003824|GO:0005992
Lele55g0524 873 CDD HAD_TPP 606 846 - -
Lele55g0524 873 Gene3D Glycogen Phosphorylase B; 327 542 - -
Lele55g0524 873 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 603 720 - -
Lele55g0524 873 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 42 852 IPR001830 GO:0003824|GO:0005992
Lele55g0524 873 FunFam Trehalose-6-phosphate synthase 2 687 766 - -
Lele55g0524 873 SUPERFAMILY HAD-like 604 851 IPR036412 -
Lele55g0524 873 Gene3D - 733 864 IPR023214 -
Lele55g0524 873 Gene3D - 604 720 IPR023214 -
Lele55g0524 873 FunFam Alpha,alpha-trehalose-phosphate synthase 326 541 - -
Lele55g0524 873 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 65 324 - -
Lele55g0524 873 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 733 864 - -
Lele55g0524 873 Pfam Trehalose-phosphatase 607 840 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0524 Lele-ChrLele55 3378868 3381845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0524 13 873 Trehalose Biosynthesis Gene Families AT1G23870 73.702 0.0 1361