Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0514 ATGAAAGGAGCAGAAGGGAAAGAGTACAAGAAGGGACTGTGGACGGAGGAAGAAGACAGGGTTTTGATGGAATACATTAGGGTTCACGGTAGACGCCACTGGAACCGCATCTCCAAAGTCACTGGTTTAATGAGGAGTGGGAAGAGCTGCAGATTAAGGTGGCTGAACTATCTGAGCCCAAACGTGAAACATGGAAGTTTCTCTGAGGAAGAAGACGATCTCATCATTCGCCTTCATAATCTTCTTGGAAACAGGTGGTCTCTAATAGCAGGAAGGGTACCTGGAAGAACAGACAACCAAGTAAAGAATCATTGGAATACTCATTTGTGCAAAAAACTTGGTATTACTAAACAGACTAGAAAACCTATTAAGATAAAAGAATCCTCAGAACATAGGGCTTTGGAGTCAGAAGAGACTCAAAATATTCTCATGTCTTTGAGTTCTATGCCTACTATTCCACTCGCTCTCAACAATAAAGCTGAAGAAGCTGAGATACAAGGCCAAGGTAGCTATGAGAACAACAATCCCATGGCAAACATTGATGAAGCGCAACTTTATTGGCCACCAACAGAAAATGATCACTTTGACCAAACTTTTATGTTGGATGATGATGATCATACTTTTGTTCTACATAGTCCTCCTAGGTTAATGGGATTCTTTGATGAATTCGATATAATGTAG 681 0.4082 MKGAEGKEYKKGLWTEEEDRVLMEYIRVHGRRHWNRISKVTGLMRSGKSCRLRWLNYLSPNVKHGSFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCKKLGITKQTRKPIKIKESSEHRALESEETQNILMSLSSMPTIPLALNNKAEEAEIQGQGSYENNNPMANIDEAQLYWPPTENDHFDQTFMLDDDDHTFVLHSPPRLMGFFDEFDIM 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0514 226 FunFam Transcription factor WER 65 138 - -
Lele55g0514 226 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Lele55g0514 226 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Lele55g0514 226 CDD SANT 14 58 IPR001005 -
Lele55g0514 226 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Lele55g0514 226 SMART sant 63 111 IPR001005 -
Lele55g0514 226 SMART sant 10 60 IPR001005 -
Lele55g0514 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Lele55g0514 226 FunFam Myb transcription factor 11 63 - -
Lele55g0514 226 Gene3D - 66 141 - -
Lele55g0514 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 58 IPR017930 -
Lele55g0514 226 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 157 - -
Lele55g0514 226 CDD SANT 66 109 IPR001005 -
Lele55g0514 226 Pfam Myb-like DNA-binding domain 65 109 IPR001005 -
Lele55g0514 226 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Lele55g0514 226 Gene3D - 3 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0514 Lele-ChrLele55 3280288 3282316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0514 8 115 MYB Transcription Factor Family AT5G40330 76.852 1.44e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele55g0514 Myb_DNA-binding 5.2e-14 CL0123