Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0498 ATGTCAACACTCAACGAGCTTCATCTTCAAGAACGGATATGTTACGTGAAATGTGGATTCTGCAGCACCATGTTACTGGTCACTGTTCCATGCAGCAGTTTATCAATGGAGGTGACTGTAAGGTGTGGGAACTGCACAAACCTTCTCTCTATGAATATGATGAAAGCTTCTTTTGTCCCTTTTCAACTCTTTCCTTCTCTTACTAATTGTCTTGATCAGCCCAAAGAAGGAAGTCCAGAAGAAAATACATACAAGAGTACTTGTTCTGATAGTGGCGAAGATGATGCAATTAATGAACCTCAATCTAAAGGAGATGAAGAGAGCTGTAGCCAATCAGAGCAACAGGAAGATGCTGAGGAGGTAAAATCATAG 372 0.4086 MSTLNELHLQERICYVKCGFCSTMLLVTVPCSSLSMEVTVRCGNCTNLLSMNMMKASFVPFQLFPSLTNCLDQPKEGSPEENTYKSTCSDSGEDDAINEPQSKGDEESCSQSEQQEDAEEVKS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0498 123 MobiDBLite consensus disorder prediction 72 95 - -
Lele55g0498 123 MobiDBLite consensus disorder prediction 72 123 - -
Lele55g0498 123 Pfam YABBY protein 9 112 IPR006780 GO:0007275
Lele55g0498 123 PANTHER PROTEIN YABBY 6-RELATED 1 101 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0498 Lele-ChrLele55 3175640 3176982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0498 2 60 C2C2-YABBY Transcription Factor Family AT1G23420 66.667 2.13e-22 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele55g0498 YABBY 2.4e-23 CL0114