Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0487 ATGAAGAAAGCAATTCAATTAGTCTCTTTTCAATCCCTTTTTCTCTTTTCACTATTTATTCTACCAGAAACTGTAGTGGCAGATCCAAGAACAAAGACAGTGCAAATAATGTGTGGTAATCAGAGAGAACACAATATGACAAACTTTGTCACAAATTTTGTTACAACCATGGATGATATCAGTGATCAGATGCGAAATCATGGGTATGGCACTGCAGTTTCAGGAACAGGTCCTGATACTAACTATGGTCTTGCGCAGTGCTATGGAGATCTTTCTTTACTTGACTGTGTTCTATGTTATGCCGAGGCTCGCACAGTTCTTCCCAAGTGCTTCCCCAGCAATAGCGGTCGTATATACCTTGATGGTTGCTTTATGAGGGCTGAGAATTACAGCTTCTTTGATGAGTATAAAGGAGGAGGAGACAGGGTTGTGTGTGGAAACACGACCAGGAAAAACTCGAGTTTTCGAGTAGCAGCGAAGCAGGCGGTTCTGAGTGCAGTTGAAGCTGCAATGTATAATAAAGGGTATGCAAGGGAGAAGGTTGCTGTATCAGGAACAACAAATGAATCAGCTCATGTTCTGGCTAATTGTTGGAGAAGTTTGAGCATGAATTCTTGTAAAGCTTGTCTTGAAGATGCTTCTTCTTCGATCTTGGGATGCTTGCCCTCGTCGGAAGGAAGAGCTCTGAACACCGGCTGCTTCATGAGGTATTCAAACACAGATTTTCTCAACAATGAACTGGAAAATAGAAGTTCATCAGGTAATGTAATTGTGCTAGTGGTTGCAATTATCAGTTCAGTGATTGTTTTCGTGCTTGCAATAGCCATTGGGGTTTATGTCTGGAAACAGAGATACATTCAAATGAAACGAAGAGGTTCAAATGATGTGGAGAAGTTAGCGAAGACCCTTCACCATAACAGCTTGAACTTCAAGTACTCGACCTTGGAGAGGGCAACCGACTCTTTCGATGTCGCGAACAAGCTCGGACAAGGAGGGTTTGGGACAGTTTACAAAGGAATTTTGCCTGATGGAAGAGAGATTGCAGTGAAGAGGTTATATTTTAACAACAGACATAGAGCAGAAGATTTCTATAATGAAATCAACATAATCAGCAGCGTGGAACATAAAAATCTAGTCAGATTATTAGGATGCAGTTGTTCAGGACCCGAAAGCCTCCTCGTATATGAGTATCTACCCAACAAGAGTCTCGATCATTTCATTTTTGATAAAAACAGAGGCAAGGAACTAAGCTGGGATAGGAGATATGAAATTATTTTTGGTACTGCAGAAGCATTAGTTTACCTGCACGAGAAGTCCAAGATTAAGATAATTCACAGAGATATAAAAGCTAGCAATATCTTATTGGACACGAGGCTTCGAGCTAAAATCGCGGATTTCGGTTTGGCTAGGTCTTTCCAAGAAGACAAAAGCCACATCAGCACAGCTATTGCAGGAACTTTAGGGTATATGGCTCCAGAGTACCTAGCTCATGGTCAATTAACAGAGAAAGCAGATGTATATAGTTTCGGCGTGCTTCTGCTGGAAATAGTCACCGGGAGACAGAACAACAGAAGCAAAGCAACAGAATATTCAGACAGCCTAACTACAGTGACATGGAAGCATTTCCAGTTGGGTACAGCAGAAAAACTATTTGATCCGAATCTAATAACATCAGAAGAAAACAACAATTGCAATGTTAAAGACGAAATTTTAAGAGTGATGCAGATAGGACTTCTATGTACTCAAGAGATGCCTTCACTGAGACCAACTATGTCAAGAGCATTAGAAATGATAACTAAGAAGGAGGAGCAACTTCCAGCTCCCTCTAATCCACCCTTCATAGATGAAACCACAATGGAACTTCAAGACATATATGATGATCCACTCTTTCCTCTCAATGCTGCAGATTCAATTGCTACAATCTCCCACAGTGAATTTTATCCCAGGTGA 1950 0.4097 MKKAIQLVSFQSLFLFSLFILPETVVADPRTKTVQIMCGNQREHNMTNFVTNFVTTMDDISDQMRNHGYGTAVSGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPKCFPSNSGRIYLDGCFMRAENYSFFDEYKGGGDRVVCGNTTRKNSSFRVAAKQAVLSAVEAAMYNKGYAREKVAVSGTTNESAHVLANCWRSLSMNSCKACLEDASSSILGCLPSSEGRALNTGCFMRYSNTDFLNNELENRSSSGNVIVLVVAIISSVIVFVLAIAIGVYVWKQRYIQMKRRGSNDVEKLAKTLHHNSLNFKYSTLERATDSFDVANKLGQGGFGTVYKGILPDGREIAVKRLYFNNRHRAEDFYNEINIISSVEHKNLVRLLGCSCSGPESLLVYEYLPNKSLDHFIFDKNRGKELSWDRRYEIIFGTAEALVYLHEKSKIKIIHRDIKASNILLDTRLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKATEYSDSLTTVTWKHFQLGTAEKLFDPNLITSEENNNCNVKDEILRVMQIGLLCTQEMPSLRPTMSRALEMITKKEEQLPAPSNPPFIDETTMELQDIYDDPLFPLNAADSIATISHSEFYPR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0487 649 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Lele55g0487 649 CDD STKc_IRAK 328 600 - -
Lele55g0487 649 FunFam Cysteine-rich receptor-like protein kinase 2 398 606 - -
Lele55g0487 649 Pfam Salt stress response/antifungal 148 239 IPR002902 -
Lele55g0487 649 Pfam Salt stress response/antifungal 43 130 IPR002902 -
Lele55g0487 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Lele55g0487 649 FunFam Cysteine-rich receptor-like protein kinase 3 141 242 - -
Lele55g0487 649 Gene3D Phosphorylase Kinase; domain 1 283 397 - -
Lele55g0487 649 ProSiteProfiles Gnk2-homologous domain profile. 31 132 IPR002902 -
Lele55g0487 649 FunFam Cysteine-rich receptor-like protein kinase 2 31 132 - -
Lele55g0487 649 Gene3D Transferase(Phosphotransferase) domain 1 398 610 - -
Lele55g0487 649 SMART serkin_6 322 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0487 649 ProSiteProfiles Protein kinase domain profile. 322 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0487 649 SUPERFAMILY Protein kinase-like (PK-like) 306 622 IPR011009 -
Lele55g0487 649 Gene3D - 30 132 IPR038408 -
Lele55g0487 649 Gene3D - 142 242 IPR038408 -
Lele55g0487 649 FunFam Putative DUF26-domain receptor-like protein kinase family protein 284 397 - -
Lele55g0487 649 Pfam Protein kinase domain 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0487 649 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 619 - -
Lele55g0487 649 ProSiteProfiles Gnk2-homologous domain profile. 137 242 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0487 Lele-ChrLele55 3086942 3090118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0487 13 649 Receptor kinase-like Gene Family AT1G70520 66.614 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele55g0487 Pkinase 1.3e-47 CL0016