Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0484 ATGAAAGTCTCAGGTTCTACAATGGAATCTCTGCAATCAAAATTTGCTCTTCCTGTGGATTCTGATCACAAGGCCACAGAATTCAATTTATTCACAGTGGCTAAGCCCCATATGCGCGCATTCCATCTATCTTGGATTTCCTTCTTCTCATGCTTTGTCTCCAGTTTTGCTGTGGCTCCTCTCCTTCCAATCTCTCGTGACAACCTCAACCTGACAGCAACAGACATTGGAAATGCTGGGATTGCATCTGTTTCAGGAGCAGTTTTTGCTCGAATTGCAATGGGGACTGCCTGTGACTTATTTGGGCCCCGTCTTGCATCTGCTTCTATCATTCTCCTCACAGCACCAGCTATCTTCTTAACTTCCCTTATTTCATCTGCTAACTCTTTCCTACTTGTTCGCTTTCTAACGGGTTTCTCCTTAGCCACCTTTGTCTCAGCCCAGTTCTGGATGAGTTCTATGTTTTCTGCTCCAGTTGTTGGTTTTGCAAATGGAGTTGCAGCTGGATGGGGAAACCTAGGAGGAGGAGCCACACAACTACTTATGCCCTTTGTCTTTGCACTAATCCATAGTATTGGCGCTGTCAAATTCACAGCTTGGAGAATTTCATTCTTCATTCCTGCAATGTTTCAAATGTTAACAGCATTTGCCATATTAATATTTGGCCAGGATTTGCCAGATGGGAATTCCATGGCCCGAAAAAATCAGGGGAAAAGGCAAAAGATGGCTTCCCACAGATTTGATCTAAAACTCCAAACAGCAGGAATGATTGCTGCAAGCTTTGGATTAGCCAATGCGATTTCTCAACCTGCCGGGGGCTATATATCAGATGTAATGGCAAAGTGGTTTGGAATGAGAGGTAGGCTATGGGCCTTGTGGCTGTGTCAAACCTTAGGACGTGTATTCTGCATAATCCTTGGCAAGGTCGGATCTCTTAGTCTATCCATCGATATCATGATCATATCCTCTATATTTGTTCAAGCTGCTTGTGGGCTGACATTTGGGCTGGTTCCTTTTGTCTCAAGAAGATCATTGGGGGTGATATCCGGAATGACAGGAGGAGGAGGAAATGTAGGCGCTATTTTGACACAACCAATTTTCTTCAAAGGATACAAATATTCAAAAGAACGAGAAGAAGATTACTACTTGTCTGAGTGA 1158 0.437 MKVSGSTMESLQSKFALPVDSDHKATEFNLFTVAKPHMRAFHLSWISFFSCFVSSFAVAPLLPISRDNLNLTATDIGNAGIASVSGAVFARIAMGTACDLFGPRLASASIILLTAPAIFLTSLISSANSFLLVRFLTGFSLATFVSAQFWMSSMFSAPVVGFANGVAAGWGNLGGGATQLLMPFVFALIHSIGAVKFTAWRISFFIPAMFQMLTAFAILIFGQDLPDGNSMARKNQGKRQKMASHRFDLKLQTAGMIAASFGLANAISQPAGGYISDVMAKWFGMRGRLWALWLCQTLGRVFCIILGKVGSLSLSIDIMIISSIFVQAACGLTFGLVPFVSRRSLGVISGMTGGGGNVGAILTQPIFFKGYKYSKEREEDYYLSE 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0484 385 SUPERFAMILY MFS general substrate transporter 26 367 IPR036259 -
Lele55g0484 385 Gene3D MFS general substrate transporter like domains 32 234 IPR036259 -
Lele55g0484 385 FunFam High affinity nitrate transporter 2.5 33 229 - -
Lele55g0484 385 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 241 IPR044772 GO:0015112
Lele55g0484 385 Pfam Major Facilitator Superfamily 45 224 IPR011701 GO:0022857|GO:0055085
Lele55g0484 385 Gene3D MFS general substrate transporter like domains 237 382 IPR036259 -
Lele55g0484 385 FunFam Nitrate transporter 2.1 239 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0484 Lele-ChrLele55 3074551 3076598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0484 14 376 Inorganic Solute Cotransporters AT1G12940 63.930 0.0 512