Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0478 ATGACCACCACAAGCATGGCTTCCTTTAATCTCCTTCCTTCTCTAACCCATCTTTCTCTTGTGGCTACTTTATTTGTTACAGTTATTTCCTTTCAAACTTCCATCAAAGCATCTTATATGGTCCCTTTTAAATGCTCTGCAAAAATCAACACATGTAATGCATCCCTTTACCACATAAACCATGGTCTTGACATAGAAGACATAGCCTCTCTTTACTCTGTTAATTCATCCCAAATCCGACCAATAACTCGGGACACCAACCAAGACTACCTCGTAACTGTTCCTTGTTCTTGTCAAATCGTCACTAACCTTGGGGGATATTTCTTTGGCACAATACACACAGTGGAGCCAAATGAGACATATATGAATATTTCAGACTTCTTTTACAGTGGACAAGCCTGGTCTCCTACTGATAATAATCTAACCCCAGGGGAAAACTTAACAATATATCTTCCATGTGGATGTTCAGAAAGTGATTCTCAAATCGTTGTGACATATACAGTTCAGCAGAATGATACAACAGCAGAAATCGCTAATCTGCTTTCATCTACACTTGCTGGCATTCAAAACATGAATGAAGTTTTAGCTAATAGGCCTTCATTCATCGATGTCAGTTGGGTGTTATATGTTCCTATGGAGCTCAATGGGACCCCATCTTCAAAAGGAAGAGGAAAGAAACGAAAGCTTTCTATTATCATTGGTGTCTTAGTGGGTGTGGCATTACTTTCTGTTATTACAATAACTATTCTCATTCTGAGGAGGAAAAGAGCCACTGAAACCAGCAAAGAAGATACAACAGCCGTATCGAAAAGATCAACTTCAAAAGCATTCTCTAAAAGATCGAGTTCCAATAGAACTATTTCCTTAAAGAACCATCAATTTCATATAGAAACTATAGAAGAAGTAACATCAATTGACTCAGAAAGACCAGTAACATTCTATCTTGAGGAGATTGAGGAGGCCATAAACAAAGAAAGTAAAATAATAGGAAAGGGTGGATATGCGACTGTGTATTTTGGAATTTTAGGAGAAAAGGAGGTTGCTATAAAAGAGATGAGGTCTAATAAATCCAAAGAGTTCTATGCAGAACTTAAAGTCTTATGCAGGATCCATCATATCAACATTGTGGAGCTATTGGGATATGCCAGTGGAGAAGACAACCTCTATTTGGTGTATGAGTATGTTTCAAAAGGATCTCTCAGTGACCATCTTCATGATCCATTTCTAAAAGGTCATGAGCCCCTTTCATGGACTGCTAGAGCACAGATTGCTCTGGATGCTGCAAAAGGTCTTGAATACATACATGATTACACGAAAGCACGGCATGTGCACCGAGATATCAAGACGAGCAATATTCTTCTCGACAATAAACTCAGAGCTAAGATTGCAGATTTTGGACTAGTAAAGCTGTTAGAACGAACAAATGATGATGATTTTATAGCAACCAGGCTTGTTGGAACACCAGGCTACCTTCCACCAGAATCCGTGAAGGAGCTTCAGGTGACCTCAAAAACTGACATTTTTGCCTTCGGAGTAGTTCTAGCAGAGCTAGTAACAGGGAAACCTGCTCTATTTCGTGACAACAAAGAAACCCCCAGAATGAAATCACTTATTTCTGTCATTAATAAAGTATTTGAAGCTGATGACCCAGAGAGTGCTTTAGAGGATATCATAGACAAAAACCTTCAAGATAACTATCCTGTGGACGATGTCTTCAAGATGATAGAAATAGCAGAAAGATGCTTACGTGAAGAACCAGTAGAGAGACCAGAAATGAGGGAGATTGTGGTGATATTGTCACAGGTTTTGATGTCATCCACAGAGTGGGAAGCATCACTAGGTGGAAACAGTGAAGTCTTCAGCGGCATATTTTCTGGAAGATGA 1884 0.3923 MTTTSMASFNLLPSLTHLSLVATLFVTVISFQTSIKASYMVPFKCSAKINTCNASLYHINHGLDIEDIASLYSVNSSQIRPITRDTNQDYLVTVPCSCQIVTNLGGYFFGTIHTVEPNETYMNISDFFYSGQAWSPTDNNLTPGENLTIYLPCGCSESDSQIVVTYTVQQNDTTAEIANLLSSTLAGIQNMNEVLANRPSFIDVSWVLYVPMELNGTPSSKGRGKKRKLSIIIGVLVGVALLSVITITILILRRKRATETSKEDTTAVSKRSTSKAFSKRSSSNRTISLKNHQFHIETIEEVTSIDSERPVTFYLEEIEEAINKESKIIGKGGYATVYFGILGEKEVAIKEMRSNKSKEFYAELKVLCRIHHINIVELLGYASGEDNLYLVYEYVSKGSLSDHLHDPFLKGHEPLSWTARAQIALDAAKGLEYIHDYTKARHVHRDIKTSNILLDNKLRAKIADFGLVKLLERTNDDDFIATRLVGTPGYLPPESVKELQVTSKTDIFAFGVVLAELVTGKPALFRDNKETPRMKSLISVINKVFEADDPESALEDIIDKNLQDNYPVDDVFKMIEIAERCLREEPVERPEMREIVVILSQVLMSSTEWEASLGGNSEVFSGIFSGR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0478 627 ProSitePatterns Protein kinases ATP-binding region signature. 329 350 IPR017441 GO:0005524
Lele55g0478 627 Gene3D LysM domain 158 219 IPR036779 -
Lele55g0478 627 Gene3D Transferase(Phosphotransferase) domain 1 395 615 - -
Lele55g0478 627 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 29 621 IPR044812 GO:0019199|GO:0045087
Lele55g0478 627 FunFam PTI1-like tyrosine-protein kinase 3 395 613 - -
Lele55g0478 627 SUPERFAMILY Protein kinase-like (PK-like) 312 599 IPR011009 -
Lele55g0478 627 ProSiteProfiles Protein kinase domain profile. 323 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0478 627 MobiDBLite consensus disorder prediction 261 281 - -
Lele55g0478 627 SUPERFAMILY LysM domain 164 212 IPR036779 -
Lele55g0478 627 SMART serkin_6 323 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0478 627 Pfam Protein kinase domain 325 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0478 627 ProSiteProfiles LysM domain profile. 164 210 IPR018392 -
Lele55g0478 627 Gene3D Phosphorylase Kinase; domain 1 293 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0478 Lele-ChrLele55 3023539 3026810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0478 308 627 Receptor kinase-like Gene Family AT1G51940 51.368 6.09e-115 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele55g0478 Pkinase 2.5e-50 CL0016