Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0473 ATGGCCGTTAATCTGGGGAAATTGTCTCTGTTACTAGATGGGGCGTCGCCGCGGGGTGTAATACTGGAGCGGAAGGCTCGAACGGTGGCTGTGGACGTCATTTTGAGCTTGCCCAAGAGAGATTCTCATGCCTACGGAGCTTCTGTTACATATAAGGGTTTTGACTACGATGGAGAAGCTCGGAACAGAGTCGTAGCTCGTGGTAAGTCAAATTCAGAGGTGAACGGTGTTGATTTTGATGCGGAGTCTAGTGATGAGGAGAACGAGAACGGGCTTGACGAGGAGTCTTATGATTGGGAGACGCAATTGCGGATGAGACTGAAGGAGCTCGAAGAGAGAAGAGAGCTGGAGAAGAAAGCTGAGGAATTGCAGAGTCAGATGGACGATGATGAAGGGGGAGGAGGTGAAGAAACAGAGGAAGAGAAGAGGATGAGAGTCAGAAAAGAGCTTGAAAAGGTGGCTAAGGAGCAGGCAGAGAGGAGGGCCACGGCTCAGCTGATGTTTGAATTGGGTCAGAAAGCTTATGGGAAGGGTATGTATGGACGTTCTATAGAGTTTCTTGAAGGAGCACTAACGATTATTCCCAGGCCTACATTGTTTGGTGGTGAGATACAGATATGGCTTGCTATGGCTTATGAGGCCAATAACCGCCATATGGATTGCATAGCTCTGTACCAGCAGTTAGAGAAGAAACACCCTAGCCTCAGCATCAGACGTCAAGCTGCAGATCTTCGCTACATTTTGCAAGCACCAAAGCTCAAGATATCTCAAGAGGAGATGGTGACTATACCTTTGATTGGTTCCAGTTATGACAGCTATGCTGGAACATGGAGTGATAAATACAAGGACAAGGGTAAGAATCGAAGTGGGACAGTGACCAATCAGCTTCCATCATCGAAAGACTATCTCGCCGACTTTCTTGTATGGCGGCCGCCGGTTGGATTGGAGAAAAGTCGAGCTTTCTGGGTTGGTCTGACAATATGGTTGGGATTAGTTGGAGCTGCTCTTCAAATCCTGGGGCCGCCGATTCCTGAGAGAAGAGAAGCTTTTGCGGCGAGAGATAGATCGGAGATGACGACCCGCTTCAAGAAGAACCGTAAGAAGCGCGGCCACGTGAGCGCCGGTCACGGTCGTATCGGCAAGCACAGGAAGCACCCAGGTGGTCGTGGTAATGCTGGTGGTATGCACCACCACAGAATCCTCTTCGACAAGTATCACCCCGGTTATTTCGGGAAAGTAGGTATGCGTTACTTCCATAAGCTTCGCAATCAGTTCTACTGCCCCATTGTCAACATCGACAAGTTGTGGTCATTGGTTCCTAATGAGGTCAGAGAGAAGGCCTCCAAGGACAATGTTCCCATGATCGATGTCACTCAGCATGGGTACTTCAAGGTTTTGGGTAAAGGAGTTTTGCCGGAGAACCAGCCTGTTGTGGTGAAGGCAAAGCTTGTTTCCAAGAATGCGGAGAAGAAGATCAAGGAGGCCGGTGGGGCTGTGGTTCTTACTGCTTAG 1512 0.494 MAVNLGKLSLLLDGASPRGVILERKARTVAVDVILSLPKRDSHAYGASVTYKGFDYDGEARNRVVARGKSNSEVNGVDFDAESSDEENENGLDEESYDWETQLRMRLKELEERRELEKKAEELQSQMDDDEGGGGEETEEEKRMRVRKELEKVAKEQAERRATAQLMFELGQKAYGKGMYGRSIEFLEGALTIIPRPTLFGGEIQIWLAMAYEANNRHMDCIALYQQLEKKHPSLSIRRQAADLRYILQAPKLKISQEEMVTIPLIGSSYDSYAGTWSDKYKDKGKNRSGTVTNQLPSSKDYLADFLVWRPPVGLEKSRAFWVGLTIWLGLVGAALQILGPPIPERREAFAARDRSEMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNQFYCPIVNIDKLWSLVPNEVREKASKDNVPMIDVTQHGYFKVLGKGVLPENQPVVVKAKLVSKNAEKKIKEAGGAVVLTA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0473 503 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 386 500 IPR021131 -
Lele55g0473 503 PANTHER ORF03 PROTEIN 9 337 - -
Lele55g0473 503 FunFam 60S ribosomal protein L27a 415 503 - -
Lele55g0473 503 MobiDBLite consensus disorder prediction 117 144 - -
Lele55g0473 503 FunFam Predicted protein 149 297 - -
Lele55g0473 503 Gene3D - 415 503 - -
Lele55g0473 503 Coils Coil 100 133 - -
Lele55g0473 503 MobiDBLite consensus disorder prediction 67 97 - -
Lele55g0473 503 Gene3D Tetratricopeptide repeat domain 149 288 IPR011990 GO:0005515
Lele55g0473 503 MobiDBLite consensus disorder prediction 79 96 - -
Lele55g0473 503 MobiDBLite consensus disorder prediction 354 391 - -
Lele55g0473 503 SUPERFAMILY Ribosomal proteins L15p and L18e 363 502 IPR036227 -
Lele55g0473 503 Hamap 50S ribosomal protein L15 [rplO]. 358 502 IPR030878 GO:0003735|GO:0006412|GO:0015934
Lele55g0473 503 ProSitePatterns Ribosomal protein L15 signature. 464 496 IPR001196 GO:0003735|GO:0005840|GO:0006412
Lele55g0473 503 Coils Coil 136 156 - -
Lele55g0473 503 MobiDBLite consensus disorder prediction 362 391 - -
Lele55g0473 503 SUPERFAMILY TPR-like 161 235 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0473 Lele-ChrLele55 2986026 2990097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0473 358 503 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 89.041 1.30e-94 281