Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0464 ATGGAAGAAGCACTGAGGAGGCTTAACGGGTTAGCCCCGATTCCAGAACCCGATACACAGGACTCTATCTCCGACACCCTGAAGAAGTGCCCAGCCGCCACCACGACCAAGAAGACGGCCAGAGAAAACGGCGGCACTATGAGGTACCGCGGCGTTCGGCGCAGGCCCTGGGGCCGTTACGCGGCGGAGATAAGAGACCCTCAGTCCAAGGAGCGACGGTGGCTCGGCACTTTCGACACGGCGGAGGAAGCTGCATGCGCCTATGACTGCGCTGCCCGAGCCATGCGTGGCCTCAAAGCTCGAACCAATTTCGTTTACCCGACTTCACCGCCTAATTCTGCAACCACCGAACATCTCTTCCCTCATTTCGCCTTCCTCAAACAATCTCACAATCAAATGAACAAGAACCTTAACCCTCATAACCGCCCTTTAGGCTGGCCTTCTTCTAGCTCTAGCCCTCACGTCGCCGATTTTTCATCTCCTCCTAATTCTTCTCTGAACATGTTTCTGTTTCGTGACTACCTTAACTCTGCTTCTAACCCATCTCTGGTTACTTCTGCTCAGCAACTTTACAACCCCGTGAACAAGATCACATGTTCTTGTTCTGGCTCCTCGTCTTCCACATCTTTAATTCCGTCTAGTTCTGTCCCAGGTTGCTGTGTCGTGAATTCTGCTGGCGGCGATGTGGAGTATGCCAAAATTACTGAAGCTGATGAAGAATCTGAATTCTTTCCCAGAGAGCATTCAGACTCTGGATTGTTGGAAGAGATAGTCCATAGGTTCTTGCCAAAATCATCAAAGCCCAACCAGCAGCAGTCGGAGGTTCGAGTGAAAGAGGAAAATCTGTCTCTGTCGACACCACAGTTTCTTCCTCCTCAGCCAGTGTATAATGATCATGGCATGTTCACTTCCAACACTTCTCCGAGCTATGAAAGTATTAGGAATAAGGAGGTGACCAAGGCTGAGGATTATATTAATGTGTCTTATGATTACCAAGGTTTCCCCATGCAGCAATTTGACAGCTTTCAGAATGGGTTCAGCACAGGACAAGGCTTGCCTCTCAGCAGCGACCGCCTCCACTTGATGATGAACGAAGCAGGGTACTCCATCGTGGATGATATTTTCCAGTACCCAGAGCTTCTTAATGAATTTGTAGCTAGGATACAGAACGCTTAA 1176 0.4966 MEEALRRLNGLAPIPEPDTQDSISDTLKKCPAATTTKKTARENGGTMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPPNSATTEHLFPHFAFLKQSHNQMNKNLNPHNRPLGWPSSSSSPHVADFSSPPNSSLNMFLFRDYLNSASNPSLVTSAQQLYNPVNKITCSCSGSSSSTSLIPSSSVPGCCVVNSAGGDVEYAKITEADEESEFFPREHSDSGLLEEIVHRFLPKSSKPNQQQSEVRVKEENLSLSTPQFLPPQPVYNDHGMFTSNTSPSYESIRNKEVTKAEDYINVSYDYQGFPMQQFDSFQNGFSTGQGLPLSSDRLHLMMNEAGYSIVDDIFQYPELLNEFVARIQNA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0464 391 CDD AP2 48 104 IPR001471 GO:0003700|GO:0006355
Lele55g0464 391 SMART rav1_2 48 113 IPR001471 GO:0003700|GO:0006355
Lele55g0464 391 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 37 223 - -
Lele55g0464 391 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Lele55g0464 391 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Lele55g0464 391 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Lele55g0464 391 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
Lele55g0464 391 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Lele55g0464 391 MobiDBLite consensus disorder prediction 1 25 - -
Lele55g0464 391 FunFam Ethylene-responsive transcription factor 2 47 106 - -
Lele55g0464 391 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0464 Lele-ChrLele55 2937305 2938480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0464 1 264 AP2-EREBP Transcription Factor Family AT1G24590 41.901 2.37e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele55g0464 AP2 2.9e-12 CL0081