Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0459 ATGGGCATGGAGTCGCTGGGGATATCTCCGATAGTGAAAATGCCGAACCCCACCGGGGCAGGAGAAGCTATGGTGTTGCCTCAACCCACGAGGAATTATTATAACAGTAACAGTAAGGGAAGGTATAGAGAGTGCCTGAAGAACCACGCTGTGAGTCTCGGCGGACACGCGCTTGACGGATGTGGGGAGTTCATGCCGGCCGGAGCCAAAGGCACACTCGACGCCCTCAAATGTGCCGCCTGCAACTGCCACCGTAATTTCCACCGCAAAGAGACTGAACCATTTTTGTTAACCCCCCATTACCAGCACCCCCAGCCGCCGCAGTTTGCGGCAGCATATTATCGAGCGCCGGCGGGGTACTTACACGTAGCGGGGCATTACAGGGGAGGACCGGCGACACTGGCGTTGCCGTCTACGTCGGGAGGAGGTGGCGGGACACAGAGCGACCAAGACGACGACGCTTCGAACCCGAGCGGAGGAGGAGGGTCGTCGTCGAAGAAGAGGTTCAGGACAAAATTCACGCAGGAGCAGAAGGATAAAATGCTGGAAATTGCAGAGAGATTGGGATGGCGGATTCAGAAACAAGACGAAGAGTTGGTCCAGCAATTCTGTAACGAAGTTGGAGTGAAGCGTCAGTGTTTGAAGTAA 648 0.554 MGMESLGISPIVKMPNPTGAGEAMVLPQPTRNYYNSNSKGRYRECLKNHAVSLGGHALDGCGEFMPAGAKGTLDALKCAACNCHRNFHRKETEPFLLTPHYQHPQPPQFAAAYYRAPAGYLHVAGHYRGGPATLALPSTSGGGGGTQSDQDDDASNPSGGGGSSSKKRFRTKFTQEQKDKMLEIAERLGWRIQKQDEELVQQFCNEVGVKRQCLK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0459 215 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 36 215 - -
Lele55g0459 215 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 166 215 IPR006455 -
Lele55g0459 215 SUPERFAMILY Homeodomain-like 155 214 IPR009057 -
Lele55g0459 215 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 42 91 IPR006456 -
Lele55g0459 215 Gene3D - 150 215 - -
Lele55g0459 215 Pfam ZF-HD protein dimerisation region 41 92 IPR006456 -
Lele55g0459 215 MobiDBLite consensus disorder prediction 134 170 - -
Lele55g0459 215 MobiDBLite consensus disorder prediction 139 168 - -
Lele55g0459 215 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 41 91 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0459 Lele-ChrLele55 2880461 2881384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0459 38 215 ZF-HD Transcription Factor Family AT4G24660 54.348 1.68e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele55g0459 ZF-HD_dimer 1.2e-29 No_clan