Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0457 ATGCCCAAGGATGATTACCTTGTGAGATTGCGTCGTGGGGACTTGGACTTGAGTGTTAGGAGAGAGGCTCTTGATTGGATTTGGAAGGTTCACACCTATTATGGTTTGGGACCACTGAGCTTTTGTTTATCCGTCAACTACTTCGATCGGTTCCTATCGATGTATAATTTACCTAGGAGCCAAAAATGGACTAGGCAATTGTTAGCTGTGGCTTGTTTGTCATTAGCAACCAAAGTGGAGGAAACCGAAATGCCTCGGTTGATAGATTTTCAGGTTGAAGGACCGAAGTTTTTATTTGAAGCCAGAACCATTCAAAGAATGGAGCTATTGGTGCTGAACACATTGCAATGGAAAATGCATGCTTTCACTCCTTCTTCCTTCATAGACTACTTCCTCACTAAAATCCCTTACCACCAACATACAGACACACTAAAGTCATCCATTTCTAGATCAATACAGCTCATACTTAGTACAATCAGAGGTGTTGATTTCTTGGAATTCAGGCCTTCTGAGATAGCTGCAGCAGTGGCCATTTCTGTTTCAAGAGAACTGCAAGCAACTGAGATTGATAAGTCTATAACTTGTTTTGTGATTGTACAAAAGGAGAGAGTCATGAAGTGTGTTGAACTGATCAGAGATTTGTTTTTGGTTAGTGTTTCTTCTGCTAATTTACCTCAAAGTCCTCTGGGGGTGTTGGATCCTGCAAGCTTGAGCTATAAAAGTGAGGAACTAACAGATGGATCATGTCCAAATTCTTCTTCACATGATAGTCCAAATACTATGAGGAACAAATCAGGCAAACCTGAAGAAGACACTTCCAAGTCATGA 828 0.4094 MPKDDYLVRLRRGDLDLSVRREALDWIWKVHTYYGLGPLSFCLSVNYFDRFLSMYNLPRSQKWTRQLLAVACLSLATKVEETEMPRLIDFQVEGPKFLFEARTIQRMELLVLNTLQWKMHAFTPSSFIDYFLTKIPYHQHTDTLKSSISRSIQLILSTIRGVDFLEFRPSEIAAAVAISVSRELQATEIDKSITCFVIVQKERVMKCVELIRDLFLVSVSSANLPQSPLGVLDPASLSYKSEELTDGSCPNSSSHDSPNTMRNKSGKPEEDTSKS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0457 275 Pfam Cyclin, N-terminal domain 2 119 IPR006671 -
Lele55g0457 275 ProSitePatterns Cyclins signature. 20 51 IPR006671 -
Lele55g0457 275 FunFam D2/4-type cyclin 3 115 - -
Lele55g0457 275 MobiDBLite consensus disorder prediction 241 275 - -
Lele55g0457 275 Gene3D - 1 210 - -
Lele55g0457 275 SMART Cyclin_C_2 122 258 IPR004367 -
Lele55g0457 275 MobiDBLite consensus disorder prediction 241 261 - -
Lele55g0457 275 FunFam D6-type cyclin 116 209 - -
Lele55g0457 275 Gene3D - 3 120 - -
Lele55g0457 275 CDD CYCLIN 20 112 IPR013763 -
Lele55g0457 275 Pfam Cyclin, C-terminal domain 123 221 IPR004367 -
Lele55g0457 275 PANTHER CYCLINS 6 212 IPR039361 -
Lele55g0457 275 SUPERFAMILY Cyclin-like 104 217 IPR036915 -
Lele55g0457 275 SUPERFAMILY Cyclin-like 4 120 IPR036915 -
Lele55g0457 275 SMART cyclin_7 25 113 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0457 Lele-ChrLele55 2864159 2865884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0457 1 192 Core Cell Cycle Gene Families AT5G65420 60.000 3.12e-80 241