Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0445 ATGACTCTTCCCGGTTCTCTGCAGCTGTCCCATGATTTCGGACATTGCAGGAACCTGGGCTGCGGTAACCAACATATGACAATAATGTACAGAACCAAGTTACATTTATCAAGTGCAGATCCCTTATATCATGTTTCGTTCCTGAAGCAGGATTGCTGGAGAAGTAAACTCTTTTGCAATATCAATAGGCCAATACATACCTTATTTTGCAAATCCCATGCTTTTAAGCGCCATTCTTTTCTAGGACCATCCCCATCGAGTGAGCTACCTATTTCTAAGGTGGCAGCTACAGCACTGGCAAGGTCATATAATCTATTACAATGTAGTCCTGTCACAGTTAAGTCGATTCCAGCCATTGGCATTATCATTTTTGCTGTATGGGGTGTTGGCCCATTAATGTATCACACAAGAAAACTGCTTCTCCAGAGGAGCGACAATAGTTGGAAGAAAAGTAGCACACATTATGTAGTAACTTCTTACATTCAGCCATTACTGTTATGGACTGGAGCTATGCTTATTTGCAGAGCCTTAGACCCATTACATTTACATTCTGAAGCAGCTCAAACTGTCAAGGAACGGCTTTTGAGTTTTGTACGATCATTGTCAACTATAGTTGCCTTTGCCTATTGTTTATCATGTGTGATTCAACAAGCACAGAAATTCTTCACGGAGAGTGCTGCAGATACCTTTGAGACAAGAAATATGGGATTCCAATTTGCAGGCAAAGCTCTTTATTCTGCAGTATGGATTGCTGCCTTCTCTTTGTTCATGGAGTTGCTGGGCTTTTCTACTCAGAGGTGGGTTACCGCAGGAGGTCTTGGGACTGTTTTGTTGACTCTTGCTGGCCGTGAGATATTTACAAACTTCCTTTCAAGTGCAATAATTCATGCAACTCGGCCTTTTGTGGTGAATGAATGGATTCAAACAAAGGTTGAAGGATATGAAGTTTCTGGTACTGTGGAGCATGTTGGATGGTGGTCACCGACAATTATACGCGGCGAAAATCGTGAAGCTCTTTACATTCCAAACCACAAGTTCACAATGAGCGTTGTGCGAAACCTCAGTCAGAAAACACATTGGCGCTTCAAGACCCACCTGGCTATTTGCCATATGGATGTTAATAAGATAAATAACATTATTGCCGACATGAGAAAAGTCTTGGCCAAAAATCCTCAAGTTGAGCAGCAGAGGCTTCACAGGAGAGTGTTTCTGGAGAATATAGATCCTGAAAATCAGGGTCTTTTGATTTTGGTGTCCTGTTTTGTCAAGACCTCACACCACGAAGAATTTTTGTGCGTTAAAGAAGCTTTACTACTGGATCTTCTTAGGGTTATTGGCCATCACCGAGCTCGACTTGCAACACCAGTTCGTACACTGCAGAAAATTTACACTGATGCTGACTTAGAGAACATACCATATTTGGATTCCGTATATAGTGGTACTGGAACGGTACCAAACAATCCAATAATAATAGAACCACCTTACAAGATCAAAGCAGATGATACGACAAAAACTCATAACAAGACAGCCACGCAAACCAAGGTTGCACCAACGGTCTCAGATTCTAAGGTTAGAGAAACTCGTTCTGACTACAAGGCAGATGTTGAAGCTGTGATATCTAATTCTGATGCAAATGGAGACTTTAAGGTTGCCGTTACATCATCCAAACCCAATCCTCAAGTGGGTGAACATGAGCCAATGAAAATGGAGTCAAAAAGTATGTCTGCTTTTGACTCCAAAGTTAGTGAAGCTGGTGTAAATAATAACATGACCGAGAAGAATTCTGATGTCGTACAATCTAAGAATGCTGTCAAAGGAGGTGGATGTCCTAAGAATATGCCAACAAAACAGAAAGATGAGAGGAAACAAGCTGGACAACCTCAAATGCCTAGGCCCGTCCTTGAAGAGAATATAGTACTTGGCGTAGCATTGGAGGGATCAAAAAGAACTCTTCCTATCGACGAGGAAATGGATTCATCTTCTACTCGAGAGGCAAAAGAAATGGCTGCCCAGGGTAGAAATAGATCCCTAACAGCTGAGAATGGGGAAGATAAGTAA 2058 0.4184 MTLPGSLQLSHDFGHCRNLGCGNQHMTIMYRTKLHLSSADPLYHVSFLKQDCWRSKLFCNINRPIHTLFCKSHAFKRHSFLGPSPSSELPISKVAATALARSYNLLQCSPVTVKSIPAIGIIIFAVWGVGPLMYHTRKLLLQRSDNSWKKSSTHYVVTSYIQPLLLWTGAMLICRALDPLHLHSEAAQTVKERLLSFVRSLSTIVAFAYCLSCVIQQAQKFFTESAADTFETRNMGFQFAGKALYSAVWIAAFSLFMELLGFSTQRWVTAGGLGTVLLTLAGREIFTNFLSSAIIHATRPFVVNEWIQTKVEGYEVSGTVEHVGWWSPTIIRGENREALYIPNHKFTMSVVRNLSQKTHWRFKTHLAICHMDVNKINNIIADMRKVLAKNPQVEQQRLHRRVFLENIDPENQGLLILVSCFVKTSHHEEFLCVKEALLLDLLRVIGHHRARLATPVRTLQKIYTDADLENIPYLDSVYSGTGTVPNNPIIIEPPYKIKADDTTKTHNKTATQTKVAPTVSDSKVRETRSDYKADVEAVISNSDANGDFKVAVTSSKPNPQVGEHEPMKMESKSMSAFDSKVSEAGVNNNMTEKNSDVVQSKNAVKGGGCPKNMPTKQKDERKQAGQPQMPRPVLEENIVLGVALEGSKRTLPIDEEMDSSSTREAKEMAAQGRNRSLTAENGEDK 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0445 685 MobiDBLite consensus disorder prediction 550 685 - -
Lele55g0445 685 Gene3D - 301 356 IPR023408 -
Lele55g0445 685 MobiDBLite consensus disorder prediction 575 601 - -
Lele55g0445 685 Gene3D - 196 299 - -
Lele55g0445 685 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 672 IPR045042 -
Lele55g0445 685 Pfam Mechanosensitive ion channel 242 446 IPR006685 GO:0016020|GO:0055085
Lele55g0445 685 MobiDBLite consensus disorder prediction 649 663 - -
Lele55g0445 685 SUPERFAMILY Sm-like ribonucleoproteins 285 355 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0445 Lele-ChrLele55 2784412 2788283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0445 9 674 Mechanosensitive Ion Channel Family AT5G10490 55.821 0.0 702