Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0438 ATGGAAGTGTTGAGGTCGACCAACTCGCAGTACCATCAATACGACGCCGCTTCTGTTGCTCCTCCTCACTACTTGGTCGATGACTTTTATGCCAATGTATGGGGAAACCCCAAGCCCCAGGTGCTGTACACAGAAGTAGAGCTTAACGAGAATAAAGAAAGTCAAGGTGCAGGGAACATGGTGGAATCGTCATTTGGTTGCCCAGGTTTCATGGAGACCCAGAATCAGGAGCAGCCAGTGCCAAAACTGGAGGATTTTCTGGGAGATTCTTCGTCGTCTATTATGCGTTACTCTGATAGCCAAACGGATACTCAAGATTCGTCGACCCTGACTCATATATACGACCAGGGCTCGGCTTACTTCAGCGACCAGCAAGATCTGAAAGCCATCGCAGGGTTCCAAGCTTTCTCAACCAACTCGGGCTCCGAAGTGGATGACTCGGCCTCCATCGGCAAAACTCAACCCGCCGGTGGCGAGTTCGCGGCTCACTCGATTGACTTGTCCGGGAATGAGCTGGCTTTCTCAAGTAGCACCACCACGGGAACTCTGTCCCTCGGCGTCACCACCACCCCACAATGTGGCGCCGATCAGAAAACCATCGTTCCGGCGGATTCCGATAGCTCCAAGAAGATGGCCGACACTTTCGGCCAAAGAACTTCGATTTACAGAGGTGTCACCAGACACCGATGGACGGGTAGATATGAAGCGCATCTCTGGGATAACAGCTGTAGGAGAGAGGGTCAGGCCAGAAAAGGGCGTCAAGGTGGATATGACAAAGAAGACAAGGCCGCGAGAGCCTATGATTTGGCAGCTCTAAAGTACTGGGGCCCCGCCGCCACCACCAACTTCCCCGTTTCCAATTATGCAAAGGAAATGGAGGAGATGAAGCATGTAACGAAGCAAGAATTTATCGCCTCACTGCGAAGGAAAAGTAGTGGATTTTCCAGGGGAGCTTCTATATACAGGGGCGTCACAAGGCATCACCAACAAGGTAGATGGCAAGCTAGGATTGGCCGTGTTGCAGGGAACAAGGATCTGTACCTTGGAACATTTGCCACTGAAGAGGAAGCAGCAGAGGCGTATGATATTGCAGCCATAAAGTTCAGAGGTGCAAATGCTGTGACCAACTTTGAGATGAGTAGATATGACGTTGAAGCCATCATGAAGAGTTCTCTTCCGATCGGCGGGGTGGCCAAACGCTTGAAGCTTTCGCTCGAATCCGAGCAGAAAGTGATTCTGAACAATAATAGCCAGCAAACCCAATGCACCAGCATGATGAGTAACAGCATCAGCTTCTCACCAATTCAGGCAGTTTCTTCCTCTGTCCCTTGTGCAATTCCATTTCATCCCGCTGCAACTGCATACTATCACCACAACCTCTTGAGCCATTTTCATCCCTCCAGCGCCGCCGAATCTGCCGTATCTAACCCTTCCGTGACGCCATATCCTACTACTCTGCCGGCACCTTCTGAGTTCTTTATATGGCCTCCTCCACATCATCAGTCATATTGA 1512 0.5079 MEVLRSTNSQYHQYDAASVAPPHYLVDDFYANVWGNPKPQVLYTEVELNENKESQGAGNMVESSFGCPGFMETQNQEQPVPKLEDFLGDSSSSIMRYSDSQTDTQDSSTLTHIYDQGSAYFSDQQDLKAIAGFQAFSTNSGSEVDDSASIGKTQPAGGEFAAHSIDLSGNELAFSSSTTTGTLSLGVTTTPQCGADQKTIVPADSDSSKKMADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWGPAATTNFPVSNYAKEMEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMSRYDVEAIMKSSLPIGGVAKRLKLSLESEQKVILNNNSQQTQCTSMMSNSISFSPIQAVSSSVPCAIPFHPAATAYYHHNLLSHFHPSSAAESAVSNPSVTPYPTTLPAPSEFFIWPPPHHQSY 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0438 503 FunFam AP2-like ethylene-responsive transcription factor 319 380 - -
Lele55g0438 503 SUPERFAMILY DNA-binding domain 220 286 IPR016177 GO:0003677
Lele55g0438 503 CDD AP2 319 380 IPR001471 GO:0003700|GO:0006355
Lele55g0438 503 CDD AP2 220 286 IPR001471 GO:0003700|GO:0006355
Lele55g0438 503 FunFam AP2-like ethylene-responsive transcription factor ANT 220 286 - -
Lele55g0438 503 PRINTS Ethylene responsive element binding protein signature 222 233 IPR001471 GO:0003700|GO:0006355
Lele55g0438 503 PRINTS Ethylene responsive element binding protein signature 360 380 IPR001471 GO:0003700|GO:0006355
Lele55g0438 503 SUPERFAMILY DNA-binding domain 319 380 IPR016177 GO:0003677
Lele55g0438 503 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 73 420 - -
Lele55g0438 503 SMART rav1_2 320 384 IPR001471 GO:0003700|GO:0006355
Lele55g0438 503 SMART rav1_2 221 290 IPR001471 GO:0003700|GO:0006355
Lele55g0438 503 Gene3D AP2/ERF domain 320 380 IPR036955 GO:0003700|GO:0006355
Lele55g0438 503 Gene3D AP2/ERF domain 221 286 IPR036955 GO:0003700|GO:0006355
Lele55g0438 503 ProSiteProfiles AP2/ERF domain profile. 221 284 IPR001471 GO:0003700|GO:0006355
Lele55g0438 503 Pfam AP2 domain 320 370 IPR001471 GO:0003700|GO:0006355
Lele55g0438 503 Pfam AP2 domain 221 276 IPR001471 GO:0003700|GO:0006355
Lele55g0438 503 ProSiteProfiles AP2/ERF domain profile. 320 378 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0438 Lele-ChrLele55 2736118 2740104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0438 34 503 AP2-EREBP Transcription Factor Family AT5G10510 56.307 3.43e-169 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele55g0438 AP2 1.2e-08 CL0081