Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0437 ATGGATTTCAGAGGGAAAGCAGGGAGAGGAGAGGCGTTCGAGGAGGAAGCATCTCCGAGAGGCGTGCTGGATATGACGGGGGAGTCAGATCGGGGTAGTAGCGGATGCAACACGTGCTCGGGGGAGAGGCCGCCGCCGGCGGGGGGGCAGATGCCGCAGTGGAAGGGAGTGATGGACGCGCTGAGGATAAACTCAGTGAAGAGGCTGTCGGCGATACCATTGTTCGCGTCGACGTACATGATATCTCGGAAGAGCCTGAAGAAATTGGCGCGCATCAGGAGCGCAGAAGACGCCATAGATCTTGTTTCTGTGGCCACCAAATCCTCCTGGAGAACCTTCTCTTACTCCGACCTTGCCGTTGCCACCGACGATTTCAGTCCTGAGAACTTGATCGGGAAAGGTGGGCATGCAGAGGTGTACAAAGGACGCTTACCAGATGGGCAAATCGTGGCAGTAAAGATGCTTATGAATGAGGAAAAGGACGACGGAGATCACACCGGTGATTTCCTGACGGAGCTTGGAATCATCGCCCACATCAACCATCCTAATTCTTGCAATTTGATTGGCTTCGGCATCGACAAGGGCCTCTTCTTCGTCCTTCACTATGCCGCTCATGGAAGCCTCTCCTCTCTCCTCTTCGGTTCCAAAAAGCTGGAGTGGAATGTTAGGTTCAAGGTAGCCATTGGAATTGCACAGGGACTGCAATATCTTCATCATGAATGCCCAAGACGAATCATTCACAGAGACATCAAGGCTTCCAACATCTTGCTCAATGAAAACTATGAACCTGAGATTTCAGATTTTGGATTGGCCAAGTGGCTCCCAGAAAAGTGGGACCATCATGTCGTCTTCCCTATAGAAGGCACATTTGGGTATCTAGCTCCAGAGTATTTTATGCATGGAGTTGTGGATGAAAAGACCGATGTTTTTGCTTATGGGGTTTTGTTGCTTGAGATCATTACAGGTCGCATGGCTGTCGATTCTGATAGTAGGCAAAGTCTTGTGATTTGGGCAAAGGCTCTACTGGACGCGAAAAACGTGAAGGAATTAGCAGACCCTAGATTAGAAGACGATTATGATCCTATAGAAATGGAGCGTGCCATGGTTACTGCTTCCGTGTGTGTAAACCACTCTGCCTCCAAGCGTCCCTTAATGAATCAGGTGGTGCAGATGCTGAAGGGAGAAGAAGGACCTGTTGAAGTAAAGCCACAAAAATCCGCAGCCCCAAGATCCCTCATGTTAGATGCCTGTGATCTTGAAGATTATACTTGCTCCAGTTACTTGAACGATCTCAATCGTCACAGGCAATTAATCATGGAATGA 1323 0.4943 MDFRGKAGRGEAFEEEASPRGVLDMTGESDRGSSGCNTCSGERPPPAGGQMPQWKGVMDALRINSVKRLSAIPLFASTYMISRKSLKKLARIRSAEDAIDLVSVATKSSWRTFSYSDLAVATDDFSPENLIGKGGHAEVYKGRLPDGQIVAVKMLMNEEKDDGDHTGDFLTELGIIAHINHPNSCNLIGFGIDKGLFFVLHYAAHGSLSSLLFGSKKLEWNVRFKVAIGIAQGLQYLHHECPRRIIHRDIKASNILLNENYEPEISDFGLAKWLPEKWDHHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAYGVLLLEIITGRMAVDSDSRQSLVIWAKALLDAKNVKELADPRLEDDYDPIEMERAMVTASVCVNHSASKRPLMNQVVQMLKGEEGPVEVKPQKSAAPRSLMLDACDLEDYTCSSYLNDLNRHRQLIME 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0437 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Lele55g0437 440 ProSiteProfiles Protein kinase domain profile. 125 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0437 440 MobiDBLite consensus disorder prediction 1 18 - -
Lele55g0437 440 MobiDBLite consensus disorder prediction 1 51 - -
Lele55g0437 440 Coils Coil 439 440 - -
Lele55g0437 440 ProSitePatterns Protein kinases ATP-binding region signature. 131 153 IPR017441 GO:0005524
Lele55g0437 440 SMART serkin_6 125 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0437 440 Gene3D Phosphorylase Kinase; domain 1 97 202 - -
Lele55g0437 440 Gene3D Transferase(Phosphotransferase) domain 1 204 407 - -
Lele55g0437 440 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 204 406 - -
Lele55g0437 440 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 101 202 - -
Lele55g0437 440 PANTHER OS08G0249100 PROTEIN 16 411 - -
Lele55g0437 440 SUPERFAMILY Protein kinase-like (PK-like) 106 392 IPR011009 -
Lele55g0437 440 Pfam Protein kinase domain 128 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0437 Lele-ChrLele55 2732641 2735293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0437 111 395 Receptor kinase-like Gene Family AT1G34210 43.051 3.33e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele55g0437 Pkinase 4.2e-41 CL0016