Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0431 ATGATGTCGCAGGAAAATAATTCTCCTTCTAAGGAGGCAGCCGCTAAAGAAGATAGTAGCCAAAGCTCCGGCGGTGGCCGGAAAAACGCTCTTACGAAACCACCAGAACAGGGTCTGAAGTGTCCAAGGTGTGACTCGCCCAACACCAAATTCTGTTATTACAACAATTACAGCCTGACGCAGCCGAGGCATTTCTGCAAGACGTGCCGGAGGTACTGGACCAAGGGCGGAGCCCTACGCAACGTTCCGATCGGTGGAGGCTGTAGGAAGAACAAGAAGGTGAAGTCGTCTTCTTCGAGGCTCTCCGGCGACTCCAATGACCCCGGATTCCCGGGGGAGCTTGGCGGCTTCAAGTTTTTCCATGGCCTTTCACCCACACTGGATTTTCATCTCGGAGGGTCCCTACCCTTCCCAAAACTGAACCATATTCAACCTCCACCCATATATAACCCGGTCTCATCCTTTGGGGATGTTCAAGCGGCCACCTTTGATCCGTCTGGAAGCTCAAATTCTATGGTTAACTTATATTACCAGTCAACAGGAGGAGGATTCAGCAGTGTAATTCAGGGTATGAGCTGTATGAACGTCAACAGTAACCTTGCTTCTTCAATTGAATCATTGAGTTCGGTTAATCAAGACTTGCACTGGAAGCTACAACAACAGAGGTTGGCGATGCTGTTCTGCGGTGACGATAATGGCCAGAAAGACGACGGTGTTTCAGGAGCGGTTCCTCTTGAGAACCAAATCCAGAGACCACAACCCATTTTGTTTCAGAATCTTGAGATTTCAAAGCCTGAGATGAATTGCGTGGCCGCCGGTAATTCCAGAAAAGAAGGCCCAGCTTCTGGGGATACCCCTACGGAGTGGTTCTTTGGGAATTCTCTTGCTTCCGTGACTCCTACGCCCACCAGTACCAGTAGTTGTGGGAATAATGGCCACCATGATAATGCAACCAGTAACTGGAGTTCTGTTCATGCTTGGGGTGATGTGCAGCAGCATTATAATGCTTTGCCCTAG 1017 0.4966 MMSQENNSPSKEAAAKEDSSQSSGGGRKNALTKPPEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVKSSSSRLSGDSNDPGFPGELGGFKFFHGLSPTLDFHLGGSLPFPKLNHIQPPPIYNPVSSFGDVQAATFDPSGSSNSMVNLYYQSTGGGFSSVIQGMSCMNVNSNLASSIESLSSVNQDLHWKLQQQRLAMLFCGDDNGQKDDGVSGAVPLENQIQRPQPILFQNLEISKPEMNCVAAGNSRKEGPASGDTPTEWFFGNSLASVTPTPTSTSSCGNNGHHDNATSNWSSVHAWGDVQQHYNALP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0431 338 MobiDBLite consensus disorder prediction 287 314 - -
Lele55g0431 338 MobiDBLite consensus disorder prediction 84 109 - -
Lele55g0431 338 MobiDBLite consensus disorder prediction 1 28 - -
Lele55g0431 338 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 22 158 IPR045174 GO:0003700|GO:0006355
Lele55g0431 338 MobiDBLite consensus disorder prediction 272 314 - -
Lele55g0431 338 MobiDBLite consensus disorder prediction 1 39 - -
Lele55g0431 338 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Lele55g0431 338 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Lele55g0431 338 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0431 Lele-ChrLele55 2696338 2697354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0431 2 338 C2C2-Dof Transcription Factor Family AT5G65590 39.891 8.98e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele55g0431 zf-Dof 1.3e-32 No_clan