Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0430 ATGTTACGTCGCACTGATCAAATCAAATACGAACTCGCAGAAGATGTAGACAGCGTAATGGATGAGCACTTCGTGGTTCGCACTCCAGAGAGCATTCCTCTTGATGCTGCGGCTCCTCTCCTCTGTGCTGGCATCACTGTGTATAGTCCTTTGAGGCATTTTGGACTAGACAAGCCTGGTCTCCATGTTGGTGTGGTTGGTCTCGGTGGTTTAGGCCATATGGCTGTGAAATTTGCCAAGGCCTTTCGTGCTAAGGACAATATGACACCCGACATGACAAAGAAAGCCCACCCCACATACAAACGTTATCAGCCACTAATTGGCGAAACGTACCGCGCTCTCTTCGTCATTTTTGGCCCAGTCTCTCCGTTCTTACATTTCTTTTCTTCGCGGCTGAATTCCGTCAATTCAATTCAAATGGCTTCACAACCAGAGACTGAGCATCCCAGGAAGGCTTTCGGATGGGCTGCAAGGGATACGTCTGGGGTTCTCTCTCCCTTCAACTTCTCTAGAAGGGAAACGGGAGAGAAAGATGTGACGTTCAAAGTGTTGTACTGCGGGATTTGCCACTCGGACCTCCACATGATCCAGAATGACTGGGGCAATTCTATCTATCCACTTGTACCCGGGCATGAAATTGTTGGTGAAGTAACAGAGGTAGGAAGCAAGGTTGAAAAGTTCAAAGTTGGAGACAAGGTAGGTGTGGGATGCATGGTTGGTTCATGCGGCTCATGCCAAAGCTGTGCTGAAAATCTGGAAAATTACTGCCCAAAAATGATTCTGACATATGGTGTCAAGTGTGTGGATGGTACCATCACATATGGAGGTTACTCTGACTTGATGGTTGCAGATGAGCACTTTGTGGTCCTCATTCCAGACGGCCTCCCTCTTGATGCAGCGGCTCCTCTCCTCTGTGCTGGCATCACTGTGTATAGTCCTTTGAGGCATTTCGGACTAGACAAGCCTGGTCTTCATGTTGGTGTGGTTGGTCTTGGTGGTTTGGGCCATATGGCTGTGAAGTTTGCCAAGGCCTTTGGTGCTAAGGTGACTGTAATAAGTACATCACCTAATAAGAAGGAGGAAGCAATGAAAAATCTAGGAGCTGACTCGTTTGTGGTCAGCCGGGAGCAAGATCAGATGCAGGCTGTAATGGGTACCTTCGATGGTATTATTGACACTGCCTCTGCTGTCCATCCTCTCTTGCCTTTGATAGGTCTGTTGAAATCTCATGGGAAACTTGTTATGGTGGGTGCCCCCGAGAAGCCTCTAGAGCTCCCAGTCTTTCCTTTACTTATGGGGAGAAAGTTGGTAGCAGGGAGTTGCATTGGAGGGATGAAGGAGACACAAGAAATGATTGATTTTGCTGCGAAGCACAATGTGAAACCTGAGATTGAGGTTGTTCCGATTGACTATGCGAACAAGGCAATGGAGCGTCTCGGGAAAGCAGATGTGAAGTATCGATTTGTCATCGACATTGGGAACACACTGAAACCAAGCTCTTAA 1503 0.4784 MLRRTDQIKYELAEDVDSVMDEHFVVRTPESIPLDAAAPLLCAGITVYSPLRHFGLDKPGLHVGVVGLGGLGHMAVKFAKAFRAKDNMTPDMTKKAHPTYKRYQPLIGETYRALFVIFGPVSPFLHFFSSRLNSVNSIQMASQPETEHPRKAFGWAARDTSGVLSPFNFSRRETGEKDVTFKVLYCGICHSDLHMIQNDWGNSIYPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCMVGSCGSCQSCAENLENYCPKMILTYGVKCVDGTITYGGYSDLMVADEHFVVLIPDGLPLDAAAPLLCAGITVYSPLRHFGLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKEEAMKNLGADSFVVSREQDQMQAVMGTFDGIIDTASAVHPLLPLIGLLKSHGKLVMVGAPEKPLELPVFPLLMGRKLVAGSCIGGMKETQEMIDFAAKHNVKPEIEVVPIDYANKAMERLGKADVKYRFVIDIGNTLKPSS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0430 500 CDD CAD1 153 491 - -
Lele55g0430 500 Pfam Zinc-binding dehydrogenase 333 456 IPR013149 -
Lele55g0430 500 FunFam Cinnamyl alcohol dehydrogenase 306 462 - -
Lele55g0430 500 Gene3D - 43 99 - -
Lele55g0430 500 Gene3D - 306 462 - -
Lele55g0430 500 FunFam Putative cinnamyl alcohol dehydrogenase 6 463 492 - -
Lele55g0430 500 FunFam Uncharacterized protein 155 305 - -
Lele55g0430 500 SUPERFAMILY GroES-like 159 323 IPR011032 -
Lele55g0430 500 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 33 84 IPR036291 -
Lele55g0430 500 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 210 224 IPR002328 GO:0008270|GO:0016491
Lele55g0430 500 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 295 461 IPR036291 -
Lele55g0430 500 PANTHER ALDEHYDE REDUCTASE 144 495 - -
Lele55g0430 500 Pfam Alcohol dehydrogenase GroES-like domain 177 289 IPR013154 -
Lele55g0430 500 SMART PKS_ER_names_mod 162 490 IPR020843 GO:0016491
Lele55g0430 500 Gene3D - 155 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0430 Lele-ChrLele55 2682459 2689195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0430 150 499 Monolignol Biosynthesis Gene Families AT4G37990 72.286 1.84e-173 491