Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0415 ATGGAGCTGGCACAGCTTGGTTTTCTGGAAGAGTTACTAGCTCCAAGAAGAGGAGACTCATGGACTACTATGCCCTCTGGCTTCAATGAACTCTTCCCTTCTACCTCTTGGAGTTTTGACTCTTTTGATGACAACCCTTCTTCTTTATCCTCCTTCAATCCTCCATTTTCTGCACTTCCAGCACCACTTCTAGACCACAGACTTGAATATAATTCCTACCCATTTCTTGATGGCTTCACTGGGAACAATCTTGACTCTGCACCCCCCCTTCAAGCTCATGAAGACCAAGAGCTTGCCTTTCTGGGTTTTGAGAATCAGAGTTCTGAAGAAGCAAATACCAAAAATACTGCCACTAATTGCTGCAAAATCGAAGAACAAGCCTTGGAAGCTCCAGTGTTCAACAGGGGTGTGTGTTGTGCGGAGAAGAAACCCAAATCGAAGAAGCTGGAAGGCCAGCCCTCCAAGAATCTCATGGCGGAAAGAAGAAGAAGAAAGCGCCTCAATGATCGCTTGTCCATGCTAAGATCAATCGTCCCCAAGATCAGCAAGATGGACAGGACATCTATTCTTGGAGACACCATAGATTACATGAAGGAGCTTCTGGAAAAGATAAGCAAGTTGCAGGAAGAAATGGAGAAGGAAGGTGAAAATAATCAGTTGAACTTGATAGGCATTTCCAAGGAGGTGAAGCCAAGCGAAGTAATGGTGAGAAATTCCCCTAAGTTCGAGGTTGAGAGGAGAGACCAGGACACAAGGATCAATATCTGCTGTGCCACAAAGCCTGGATTACTACTTTCAACAGTGAACGCCTTGGAAGCATTAGGTCTTGAGATTCAACAATGTGTGATAAGTGGCTTCAATGATTTCACAATGCAAGCATCTTGCTCAGAGGTGGCTGAGCAGAGAGCTTGTATTGGCTCTGAAGAGATTAAGGAAGCACTGTTCAGAAATGCAGGTTATGGTGGGAGATGTCTGGTTCAGATTGAAAGAAATGATACATCAGGGTAA 1008 0.4464 MELAQLGFLEELLAPRRGDSWTTMPSGFNELFPSTSWSFDSFDDNPSSLSSFNPPFSALPAPLLDHRLEYNSYPFLDGFTGNNLDSAPPLQAHEDQELAFLGFENQSSEEANTKNTATNCCKIEEQALEAPVFNRGVCCAEKKPKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLEKISKLQEEMEKEGENNQLNLIGISKEVKPSEVMVRNSPKFEVERRDQDTRINICCATKPGLLLSTVNALEALGLEIQQCVISGFNDFTMQASCSEVAEQRACIGSEEIKEALFRNAGYGGRCLVQIERNDTSG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0415 335 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 60 319 - -
Lele55g0415 335 Gene3D - 143 218 IPR036638 GO:0046983
Lele55g0415 335 MobiDBLite consensus disorder prediction 145 165 - -
Lele55g0415 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 200 IPR011598 GO:0046983
Lele55g0415 335 Coils Coil 194 217 - -
Lele55g0415 335 Pfam Helix-loop-helix DNA-binding domain 157 200 IPR011598 GO:0046983
Lele55g0415 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 215 IPR036638 GO:0046983
Lele55g0415 335 SMART finulus 157 206 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0415 Lele-ChrLele55 2588765 2590640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0415 142 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 68.478 1.81e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele55g0415 HLH 7.1e-10 No_clan