Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0414 ATGGGTCACCCGTGCATTGGGTTTAGCCTTTGGTCTGCCACCACCAATTCCAAATCCATAATCTTTCAGCCGAAGGCCCTGAGCTTTCTCTCTCTTTCTGGTTTTCCCTTCAATGCCTTTGCTTTGCATTTTCCTGCGAAAAAGTTTCTGAAGAATAATCGGGGGTTTTCTTCGCTGCTGATCTACCAAGACTTGGTTTGTGTGTATAGTTGGAGCTTGATGTCTCAACCAGTTCTGACTGCTCAGGAGGAAGGGCAGAGTAACACCTCAACAATAACTTCTTCACGATCATCAGATCGTATCTCCCAAAATGTGACTGGGTTAAAAGAACGCAATTACCTAGGATTATCAGATTGTTCATCAGTGGACAGCTCTACTGTTCCAAGCGACTCAGATGAGAAAAAGGACAATCTGAATTTGAAGGCTACAGAATTGAGGTTGGGTCTTCCTGGATCCCAATCACCTGAAAGGGATGATAGCTCAACAAAAGTTGATGAGAAGCCGCTGTTTCCTTTGCTTCCTACAAAAGATGGAATCTGCTCATTGTCCCAGAAAACTGTGATTACAGGCAACAAAAGGGGATTCTCTGACACCATGAATGGGTTCACTGAGGGGGAGTTTCCTGGGAATTCGGGGGTGAATGTGCTGCTGTCTCCTAGATCTGCTAGAGCTCAGCCAACCATGACAAAAGAAATGCCGACTAAGGTGGTGCAAGAACGGCCATGTGCAACTAACGGAGCAGGCTACGACAAAACGGATGCTTCTATTGGTGGGAGTGCTCCTGCCTCTAAGGCACAGGTTGTTGGTTGGCCTCCAATAAGATCATTTAGGAAGAACTCATTGGCTGTCACTTCAAAGAACAATGAAGTAGATGGAAAACTGAGTCCTGCCGCTCTCTTTGTGAAGGTGAGCATGGATGGAGCTCCCTATCTAAGGAAGGTTGATCTTAGGAGTTACAACACATACCAGGATCTGTCTTCCGCCCTTGAGAAGATGTTCAGCTGTTTTACCCTAGGTCAATGTGGTTCCCATGGGGCTCCAGGAAGAGAAATGTTGAGTGAGAGCAAGCTAAGGGACCTTCTGCATGGTTCAGAATATGTACTCACTTATGAAGATAAAGATGGTGACTGGATGCTTGTTGGGGATGTACCATGGGAGATGTTTATTGACACATGCAAGAGGCTGAAAATCATGAAAGGTTCTGATGCTATTGGCTTAGCTCCCAGGGCTATGGAGAAATCCAAGAGCAGGAGCTAG 1257 0.4598 MGHPCIGFSLWSATTNSKSIIFQPKALSFLSLSGFPFNAFALHFPAKKFLKNNRGFSSLLIYQDLVCVYSWSLMSQPVLTAQEEGQSNTSTITSSRSSDRISQNVTGLKERNYLGLSDCSSVDSSTVPSDSDEKKDNLNLKATELRLGLPGSQSPERDDSSTKVDEKPLFPLLPTKDGICSLSQKTVITGNKRGFSDTMNGFTEGEFPGNSGVNVLLSPRSARAQPTMTKEMPTKVVQERPCATNGAGYDKTDASIGGSAPASKAQVVGWPPIRSFRKNSLAVTSKNNEVDGKLSPAALFVKVSMDGAPYLRKVDLRSYNTYQDLSSALEKMFSCFTLGQCGSHGAPGREMLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKGSDAIGLAPRAMEKSKSRS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0414 418 MobiDBLite consensus disorder prediction 82 103 - -
Lele55g0414 418 MobiDBLite consensus disorder prediction 119 138 - -
Lele55g0414 418 MobiDBLite consensus disorder prediction 145 170 - -
Lele55g0414 418 Gene3D - 294 411 - -
Lele55g0414 418 Pfam AUX/IAA family 143 409 IPR033389 -
Lele55g0414 418 ProSiteProfiles PB1 domain profile. 298 402 IPR000270 GO:0005515
Lele55g0414 418 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 138 405 IPR003311 GO:0005634|GO:0006355
Lele55g0414 418 FunFam Auxin-responsive protein 293 410 - -
Lele55g0414 418 SUPERFAMILY CAD & PB1 domains 296 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0414 Lele-ChrLele55 2574288 2579584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0414 302 408 B3 DNA Binding Superfamily AT4G23980 28.972 2.52e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele55g0414 AUX_IAA 3.7e-89 CL0072