Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0398 ATGGAGGACGACTCAGGCTTAGAATATGCTATTCTGATTCCGAACCCGAAAGCCCGAAACCAGATGGGACTCGTGACGATAAAGCAAGCAGTTGATAAGAAGGGGAAACTCTGTCTCTTCTCTTCTTTCAAGCTGGCGATCGAAAACAAGGACACGTTTGTGAAGGAAATTAAGCCTAAGAACAGGAGAGTCATGGGCGCTGGAGGTCCTGACGATGAGGACAACAGGTGGCCGCCATGGTTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTACATGCTGACTCTCACAAGAGCGAATGCAATATGTATTGCTTGGATTGCATGAACGGTGCTCTCTGCTCTCTCTGCCTCGCCTACCATAAAGACCATCGCGTCATTCAGATTAGGAGGTCTTCATACCATGATGTGATTAGGGTCTCAGAGATTCAGAAAGTTTTAGACATAAGTGGTGTTCAGACCTACATTATCAACAGCGCAAGGATAGTGTTCCTGAACGAGAGGCCTCAGCCTAGGCCTGGGAAGGGCGTCACTAACACCTGCGAAGTCTGTGAACGGAGCCTTCTCGATTCGTACCGTTTCTGTTCTCTGGGTTGCAAGATCGTTGGGACGTCGAGGGATTTCCAGAAGAAGAAGAAGCAGTCTGCCGTAATGGCGTCGGACTCGGAGGATTCGTACAGCAGCAGCAGCAGCCATGGCCGTCAGAAGAACGGCAAGTCTCAGGTTCAGAGCTTCACTCCGTCAACGCCTCCTCCAACTTCGGTGAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCCCACAGAGCCCCAATGGGAGGACTAATCATACAATACTAA 849 0.4947 MEDDSGLEYAILIPNPKARNQMGLVTIKQAVDKKGKLCLFSSFKLAIENKDTFVKEIKPKNRRVMGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRVIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARIVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRDFQKKKKQSAVMASDSEDSYSSSSSHGRQKNGKSQVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIQY 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0398 282 Pfam PLATZ transcription factor 133 204 IPR006734 -
Lele55g0398 282 MobiDBLite consensus disorder prediction 222 259 - -
Lele55g0398 282 MobiDBLite consensus disorder prediction 215 276 - -
Lele55g0398 282 CDD Bbox2 93 132 - -
Lele55g0398 282 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 71 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0398 Lele-ChrLele55 2469619 2478049 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele55g0398 PLATZ 1e-29 No_clan