Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0392 ATGGGTAGGCCACCGTGTTCTGAGGAAACTGGTGTGAAGAAAGGGCCATGGACGCCTGAAGAAGATGAGAAGCTGTTTAAGTATATCAGCAAACATGGAAGTGGAAATTGGAAAGCAGTGCCAAAGCATGCCGGCCTCAATAGATGCGGCAAAAGTTGCAGGCTAAGGTGGTCGAAGATTGCAACGCATCTCCCAGGGAGGACTGACAATGAGATTAAGAACATCTGGAACACAAATTTAAGGAAGAAGCTTCTGCGGATGGGTATTGATCCAGAAACTCACAGGGCAAGAACTGACTTGAAGCATCTCTTGAATCTCTCGCAGTTGCTAGGCATGCCTAATAATAATAACTTGATGACCCCTTGGAATCATGAGGGTCTTCGGGGGTTGCAGCAACCAGATTTGACTCATCACTTAGCCCAAATCCAACTTCTGCAGAAAGTGTTGCTGCTTATGAATGGCAATTCATCGTTGGTCAGTAACATGCAGAGTAATTTCCCACTCTTGGGCAATCACAGTTTGATCAATAACCCAATAATGGGAGCAGATACAAATGGTCTGAACAATGCTCTCCTCAATAACTTGAGAGAGCAAGAATTATATGAAAGCCCTGCTCTATTTCCTTCGGCACCAAGTGAATCACGCCAGGATGTTTCAGAATCATGGGCAGACCAAGAAGGAGAATCATCACATCAAGAAGTTTCGGGTATTAATAATAGTATCAGCGGAACAACATCACATGACATAAGTCAAGCAGAAAACCTAGTTCCTACGTTTGATTCAACCACGTCCTTCAATCAAGTGGAGATTAGCCCTATTACAGATGAAGTGCCAACCCAGTCAACTTCATCCACAATCTATGATACTATTTGGGAGAAGAAGCTCTTGGAAGATGACGATGATACAAGCGATTCCTTCTGGAAAGAACTCTTAAAGTAA 939 0.4356 MGRPPCSEETGVKKGPWTPEEDEKLFKYISKHGSGNWKAVPKHAGLNRCGKSCRLRWSKIATHLPGRTDNEIKNIWNTNLRKKLLRMGIDPETHRARTDLKHLLNLSQLLGMPNNNNLMTPWNHEGLRGLQQPDLTHHLAQIQLLQKVLLLMNGNSSLVSNMQSNFPLLGNHSLINNPIMGADTNGLNNALLNNLREQELYESPALFPSAPSESRQDVSESWADQEGESSHQEVSGINNSISGTTSHDISQAENLVPTFDSTTSFNQVEISPITDEVPTQSTSSTIYDTIWEKKLLEDDDDTSDSFWKELLK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0392 312 FunFam MYB-related transcription factor 13 61 - -
Lele55g0392 312 Gene3D - 58 84 - -
Lele55g0392 312 MobiDBLite consensus disorder prediction 228 245 - -
Lele55g0392 312 SMART sant 13 82 IPR001005 -
Lele55g0392 312 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Lele55g0392 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 65 IPR017930 -
Lele55g0392 312 SUPERFAMILY Homeodomain-like 14 81 IPR009057 -
Lele55g0392 312 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele55g0392 312 Gene3D - 13 57 - -
Lele55g0392 312 PANTHER F14D16.11-RELATED 1 288 - -
Lele55g0392 312 MobiDBLite consensus disorder prediction 207 245 - -
Lele55g0392 312 CDD SANT 16 57 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0392 Lele-ChrLele55 2432031 2433219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0392 1 312 MYB Transcription Factor Family AT5G16770 36.011 1.12e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele55g0392 Myb_DNA-binding 7e-17 CL0123