Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0385 ATGACATTGGTAAGAGAGAGGAGACACCAGGAAGCTCTAAGGCTTTCCTTACCATCACCTCCAATTCCAGAACCATATTTCTGCCATCAAACCCATATCTCAGCCTCCTATAGCAATTCTATGTCCACCAAGAACCTTTTGAGCTTTGAGAAACTCACAGTTCTTGGCCATGGCAATGGTGGTACAGTGTATAAAGTCCATCACAAGAAGAACAAAACCTTCTATGCTTTGAAAGTCCTCAGGTTCAACCAGAATGCTCTTGAAATCTCTCAGCAGGCTAAACGTGAGGCAGAGATTCTCAGAAGAGTGGATTCCCCATATATTGTGAAGTGCCATGCAGTTTTTGACAATAATTGCAGTGAATCTCATGTAAATGGAGGTGGTGGTGGTGGTGGTGGTGGGATTAGCTTTGTAATGGAACACATGGAAAGAGGTTCATTACATGATGTGTTGCGAGAACACAAATCACTACCAGAGGAAGTGGTATCAGTATTGACAAAGAGAGTTTTGGAAGGACTAAACTATTTGCATGGCATGAACATAGTGCACAGAGATATCAAACCTTCAAACTTGCTTGTGAATGACAAAGGGGAAGTGAAGATTGCAGATTTTGGAGTAAGTCATGTGGTAGAAGGAAGGTTTGAGGCATCAGACTGTAACGCAGGCACGTGTGCTTATATGGGCCCAGAAAGAATTGATCCTGAGAGATGGGATGGTGAAAATGCAGATGGGTTTTCTGGGGATGTTTGGTCAGTAGGAATTTTGATGTTAGAATGTTTTCTGGGTCATTTCCCTTTTACTGATGCAGGTCAAAAACCAGACTGGGTTACATTGATGTGTGTGATTTGTTCTGGTGAGAAGCTTGAAATGCCAGAAAAGGCTTCAACTGAGTTCAAAAACTTTGTGCAGAGATGTTTAGAGAAGGATTGGAGGAAAAGAGCAACAGTTGGTGAGCTTCTTCGTCACCCTTTTGTGAATAACAAATCTAGCCCTTCTTCTAGCAATGTATTACTCAATTATCTTCTGCATTGTTGA 1035 0.4184 MTLVRERRHQEALRLSLPSPPIPEPYFCHQTHISASYSNSMSTKNLLSFEKLTVLGHGNGGTVYKVHHKKNKTFYALKVLRFNQNALEISQQAKREAEILRRVDSPYIVKCHAVFDNNCSESHVNGGGGGGGGGISFVMEHMERGSLHDVLREHKSLPEEVVSVLTKRVLEGLNYLHGMNIVHRDIKPSNLLVNDKGEVKIADFGVSHVVEGRFEASDCNAGTCAYMGPERIDPERWDGENADGFSGDVWSVGILMLECFLGHFPFTDAGQKPDWVTLMCVICSGEKLEMPEKASTEFKNFVQRCLEKDWRKRATVGELLRHPFVNNKSSPSSSNVLLNYLLHC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0385 344 ProSiteProfiles Protein kinase domain profile. 49 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0385 344 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Lele55g0385 344 CDD PKc_MAPKK_plant_like 48 325 - -
Lele55g0385 344 Gene3D Transferase(Phosphotransferase) domain 1 41 340 - -
Lele55g0385 344 SUPERFAMILY Protein kinase-like (PK-like) 49 333 IPR011009 -
Lele55g0385 344 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 36 329 - -
Lele55g0385 344 Pfam Protein kinase domain 49 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0385 344 SMART serkin_6 49 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0385 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0385 Lele-ChrLele55 2388339 2389373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0385 1 328 MAP Kinase Kinase Gene Family AT1G32320 51.351 1.45e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lele55g0385 Pkinase 1.3e-62 CL0016