Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele55g0381 | ATGCGCCACGATAGATCTAGAAGGAGAGTTTCTGCAGTTCTCGCTGGAGAAACTCATCGCCGATTTCCTATTGATGGGTTCATGAATCATGGTCTACTGATGAGGAGGGAAGGAGAAGGGAAAAGGAAAATAACGAGCTGCGCGAGAAATTGCACAAGACAAGACTACATATTGGGCAATTGGCGAAGGACACATCTGCCAAACTCAAGCAATAGTGAAATAGATTACCATGTTGAAGTTAGTGCAAGTAAGAAGATAGCAGATGCTAAACTTGCAAAAGATTTTCAGGTAGTTTTGAAAGAATTTCAGAAGGCACAGCAGCTTGCAGCCACAAGGGAGACAACCTACACTCCTTTTGTTTCACAAGCAAGTCTTCGTTCCAGTTATACAGCCAGTGAGGTGGATGTTAGTTCTGATAAGGCTGCAGAACAGCGTGCTCTTCTTGTGGAATCCAGAAGGCAAGAGGTGTTATTATTGGATAATAAGATTACCTTCAATGAAGCTATAATTGAGGAACGTGAGCATGGCATTCAAGAAATCCAAAAACAAATTGGTGAAGCAAACGAGATTTTTAAAGATCTTGCTGTGCTTGTTCATGAGCAAGGAGCCATGATTAGTAACTGA | 624 | 0.4183 | MRHDRSRRRVSAVLAGETHRRFPIDGFMNHGLLMRREGEGKRKITSCARNCTRQDYILGNWRRTHLPNSSNSEIDYHVEVSASKKIADAKLAKDFQVVLKEFQKAQQLAATRETTYTPFVSQASLRSSYTASEVDVSSDKAAEQRALLVESRRQEVLLLDNKITFNEAIIEEREHGIQEIQKQIGEANEIFKDLAVLVHEQGAMISN | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele55g0381 | 207 | CDD | SNARE_Qa | 170 | 207 | - | - | |
| Lele55g0381 | 207 | Gene3D | - | 168 | 207 | - | - | |
| Lele55g0381 | 207 | PANTHER | SYNTAXIN | 41 | 206 | IPR045242 | - | |
| Lele55g0381 | 207 | SUPERFAMILY | t-snare proteins | 73 | 206 | IPR010989 | GO:0016020|GO:0016192 | |
| Lele55g0381 | 207 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 167 | 207 | IPR000727 | - | |
| Lele55g0381 | 207 | Gene3D | - | 62 | 122 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele55g0381 | Lele-ChrLele55 | 2377927 | 2380297 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele55g0381 | 72 | 207 | SNARE and Associated Proteins | AT5G46860 | 71.324 | 1.84e-61 | 191 |