Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0362 ATGAATAAAAGTTCAGAAGCGAAGGAGCATAAGACACCTCCTGCTACGTCACAGGAGCAGCCTTCAACCGCCAGCACTGGAACAGTAAATTCTGACTGGTCTAGCTTTCAGGCATATTCTCCTATACCTCCACATGGATACTTGGCACCAAGTCCCCATGCCCATCCTTATGTGTGGGGTGTTCAGCATATTATGCCTCCCTATGGTACTCCACCACATCCCTATGTTGCAATGTATCCCCCTGGTGGAATATATCCCCATCCATCAATTCCCCCGGGATCTTATCCTTTCAGTCCATTTGCCATGCCTGCTGCTAATGGTGTTGCTGAGGCTGGAAATATACCTGCCAGCATGGGAGGTGATGCTAAGATTCCTGCGGTGAAGGAAAAATTGCCAACGAAAAGGTCAAAAGGAAATTTGGGCGGTTTGAACATGATCACTGGGAAGAATAATGAATTTAGTAAAACACCAAGGATATCTACTAATGGAATTCATCCAAAAAGTGGTGAGGGTGCAAGTGAAGATACCAGTGAAGGAAGTGATGCAAATTCTCAGGATGACCTTGAGTTCAAATCAGGGGGAAGGCGGGATTCTTTGGAAGCTGAAGCATCTCAAAATGCAGTATATGCTCCTCAAAATGGGGGAAATAATACACATCATAGAGGGGTTAATCAACCTATGCCTATCTCTGCTTCTGGTCCTCCTGGAGCAGTTCCTGGTCTCACAACAAACTTAGATATAGGAATGGATTATTGGGGAGCACCAGCTTCAGCTATTCCTGGGCTACATGGAAAGGTTCCCTTTACTGCAGTTGCTGAGGGGATGGTTACTACTGGATCACAGGATGGTGTTCAGCCACAACTACTGCTAAAGGATGAAAGAGAGGTTAAACGACAGAGGCGGAAGCAGTCTAATAGGGAATCTGCTCGCAGATCCAGGTTACGCAAGCAGGTAGAGTGTGAGGAACTAGCCGAGCTAGCTGATGCTCTGAAAGAAGAAAATGCTTCCCTCCATTCAGAAGTGAGTCGAATCAGGAGCGAGTGCGAGAAGTTGCTCTCAGAGAATGCTGCACTCAAGGAGAGACTGGGGGAATTACCTGGCAAAGAAGATCTTGGGTCTAGCAGGAATGATGAATATGTGAGTGATGAACCTCAACAGACTGGGCAAGAGGAGGATGTGAAGGGTGGTCGTTAG 1194 0.4682 MNKSSEAKEHKTPPATSQEQPSTASTGTVNSDWSSFQAYSPIPPHGYLAPSPHAHPYVWGVQHIMPPYGTPPHPYVAMYPPGGIYPHPSIPPGSYPFSPFAMPAANGVAEAGNIPASMGGDAKIPAVKEKLPTKRSKGNLGGLNMITGKNNEFSKTPRISTNGIHPKSGEGASEDTSEGSDANSQDDLEFKSGGRRDSLEAEASQNAVYAPQNGGNNTHHRGVNQPMPISASGPPGAVPGLTTNLDIGMDYWGAPASAIPGLHGKVPFTAVAEGMVTTGSQDGVQPQLLLKDEREVKRQRRKQSNRESARRSRLRKQVECEELAELADALKEENASLHSEVSRIRSECEKLLSENAALKERLGELPGKEDLGSSRNDEYVSDEPQQTGQEEDVKGGR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0362 397 MobiDBLite consensus disorder prediction 1 35 - -
Lele55g0362 397 SUPERFAMILY Leucine zipper domain 296 352 IPR046347 GO:0003700|GO:0006355
Lele55g0362 397 Pfam bZIP transcription factor 293 355 IPR004827 GO:0003700|GO:0006355
Lele55g0362 397 PANTHER G-BOX-BINDING FACTOR 3-RELATED 9 385 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele55g0362 397 Gene3D - 296 367 - -
Lele55g0362 397 MobiDBLite consensus disorder prediction 132 237 - -
Lele55g0362 397 Pfam Disordered region downstream of MFMR 129 260 - -
Lele55g0362 397 MobiDBLite consensus disorder prediction 184 198 - -
Lele55g0362 397 MobiDBLite consensus disorder prediction 205 225 - -
Lele55g0362 397 MobiDBLite consensus disorder prediction 359 397 - -
Lele55g0362 397 Pfam G-box binding protein MFMR 1 91 IPR012900 -
Lele55g0362 397 MobiDBLite consensus disorder prediction 279 317 - -
Lele55g0362 397 MobiDBLite consensus disorder prediction 288 302 - -
Lele55g0362 397 MobiDBLite consensus disorder prediction 14 35 - -
Lele55g0362 397 MobiDBLite consensus disorder prediction 359 377 - -
Lele55g0362 397 MobiDBLite consensus disorder prediction 143 179 - -
Lele55g0362 397 CDD bZIP_plant_GBF1 298 348 IPR045314 GO:0003700|GO:0006355
Lele55g0362 397 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 295 358 IPR004827 GO:0003700|GO:0006355
Lele55g0362 397 SMART brlzneu 293 357 IPR004827 GO:0003700|GO:0006355
Lele55g0362 397 Coils Coil 313 361 - -
Lele55g0362 397 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 300 315 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0362 Lele-ChrLele55 2242696 2246188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0362 1 391 bZIP Transcription Factor Family AT2G35530 56.650 2.79e-137 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele55g0362 MFMR_assoc 4.9e-41 No_clan