Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0360 ATGCAGGTCTCTGGTGCTATCACCGACGTATTGGTGGCACTCCCACCGTCGGGAGCAAAAGCAAACTTAATCTCTGGCCTTGTTTCCGCTGTTTTGGACAGACAGCTACCCGAGATAAGTGAAACCTTGGGGATAAGGCTCACATCTTCTTACTCTAAGCTGAAGAGCTGCCCTTCAATAGGAAATTCCAAGCTTTATAAACTATTCAACTGCCGATCCAGAGGGTTAGTCTTGAAAGCGTCAGCTAATTCAAATGATAATTCAGTGCCTGTTGCTCCCCTTCAATTAGAGTCACCAGTTGGTCAACTTTTGGCACAAATTTTGCAAACTCATCCTCATCTATTGCCAGCAGCCATTGATCAGCAACTTGAGAACCTTCAAAATGATGAAGAGGCCCAGAAAGAAGAATATTCGGCTCAAGATATTCTTTACCAGAGGATAGCTGAAATAAGAGAGAAAGAGAAGCGTGTAACACTGGAAGAGATAATATACTGCTCTATTGTTCAGAAATTTGTTGAAGACGGCATTGTAATGATCCCAAAAGTATCATCAATCCCTGATCCTACTGGCCGAGTGGATTTCTGGCCGAACCAAGAGCAGAAACTAGAAGCTGTTCATTCCCCGGAGGCATTTGAGATGATACAAAGCCACCTGTCTCTTGTACTAGGGGAAAAGCTTGTGGTGGGTCCTCTTCAGACTACTGTTGAGATTAGTAAAATAAAACTTGGCAAGTTGTATGCTGCTTCAATAATGTATGGTTACTTCCTGAAACGAGTCGATGAACGGTTTCAACTTGAGAGGACAATGAAAACCCTTCCAGATGATTTTGGTAAGGCAAATAATGTGAGCTTCGAAGGACCATCACCGGCAAACAGGCTCTGGGATCCCGATTCATTGATCAGAATCCCTGCATATGAAGACAACGCCATCGAGGGAGAATATTACATAGACTCTGGCGAATCCAAATCATACAGACTCAGATCTTATGTAATGTACTTGGACGCAGAGACCCTGCAGAGATATGCAACCATACGTTCTAAGGAAGCCATATCCTTGATTGAAAAGCAGACTCAGGCCGTTTTTGGGAGGCCAGACATCAGAATCACTGAGGATGGTTCTATTGAGACCCCCAATGATGAAATGCTCCCCATCACTTTCACTGGTCTGACCATGCTAGTTTTGGAGGCCGTGGCCTTCGGATCGTATCGGGATGAGGATGGAGAACCCTTGATGGACTATGATGAAGTGCAATCCGATCGTGAGCTCTCCCCTGAACCCCAACAGCAAGGACTATTCGACGATTTGGAGGAAGACGCCGATGGTTGGCGCGGGCGAGAACGATCGCAGACACCGGTCTACGATAATGATTCGTCCATGTCAAAGGCGAAGCCTAGGAAGAGGCTTATCAAGAAAAGTGACGCGGGGAGCCAGTCTATGGCTCCGGAGCTTGCTGATGAGGATGAGGAAGCGGATGGTAATATTCCGGCAAGTTTTGTGAGGGACGAATCTGAGGAGGGGGAAGGAAGAAAGAGGAAGTGGAAGGATGGTGGCAGTGGGAAGAAGGAGAAGAGGTTAGGGAGTAGTAGTAAGGGCGGCTCAAAATCTGGGTTATCGAAGAAAGGGTTTGCGGTTAAGGCAGTAAAGGATCATGATGGCGATGTCAAGGAGATGTGGGATACAATTGCTGGTGGGGACTCTGAGGATGATAAGGAGGGTGTCAGGACAGTCGATGATGATAATTTCATAGATGACACTGGAGTGGAGCCTGCTTTGTACGGTAGCGATAATGAAGCTCGTTCTCCTAGTCATTATGCCCAGGCAGAGGAGGGTGAGGAGGAGGATGAGATCAAGGAACTTTTCAAGATGGGTAAGAAGAAGAAGAAGAATGAGAGAAGTCCTGCAGAGATAGCTTTGCTAGTTGAGAATGTCATGGCTGAACTTGAGGTTACAGCTGAAGAGGATGCGGAATTCAATAGACAGGGGAAGCCTGCCATAAATAAGCTGAAGAAGCTTCCTCTTTTAACTGAAGTACTCTCAAAGAAACAACTTCAACAGGAGTTTTTAGATCATGGAGTGCTGACTTTATTGAAGAGTTGGCTTGAACCCCTCCCAGACGGAAGCTTACCAAACATAAACATCCGCACAGCAATTTTGAATATTTTGAATGATTTTCCTATAGACCTTGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTCGGAAAGGTCATTATGTTTTTGTCGAAATCTGATGAAGAAATCAACGTAAATAGGAAACTGGCTAAGGAGCTGGTTGATAAATGGAGCCGACCTATATTTAACAAGAGTACAAGATTCGAAGACATGAGAAATGTGGAGGATGACAGGATTCCTTTCAGAAGGCCACTAGTGAAGAAGCCTGCAAATAAAGCTTCAGGAATCGAATCTAGAGATGGTGATCTTGATTTGGAATTTTCACAGCGGAAGTCTGGACAATCCTCTACCAGACAACTCACTACTAGGCCAGAAGCAACACCACTGGATTTTGTGGTGCGGCCCCCATCTAAAGTTGACCCAGAAGAAGTTAGGGCCCGTGCAAAACAAGCTGCACAAGATCAGTACCGTATGAAGATGAATAAGAAGCTACAGCAATTGAGGGCACCCAAAAAGAGGCAGCTTCAAGCGACTAAGTTGAGTGTCGAAGGTCGGGGTATGACGAAGTATTTGTAA 2715 0.4538 MQVSGAITDVLVALPPSGAKANLISGLVSAVLDRQLPEISETLGIRLTSSYSKLKSCPSIGNSKLYKLFNCRSRGLVLKASANSNDNSVPVAPLQLESPVGQLLAQILQTHPHLLPAAIDQQLENLQNDEEAQKEEYSAQDILYQRIAEIREKEKRVTLEEIIYCSIVQKFVEDGIVMIPKVSSIPDPTGRVDFWPNQEQKLEAVHSPEAFEMIQSHLSLVLGEKLVVGPLQTTVEISKIKLGKLYAASIMYGYFLKRVDERFQLERTMKTLPDDFGKANNVSFEGPSPANRLWDPDSLIRIPAYEDNAIEGEYYIDSGESKSYRLRSYVMYLDAETLQRYATIRSKEAISLIEKQTQAVFGRPDIRITEDGSIETPNDEMLPITFTGLTMLVLEAVAFGSYRDEDGEPLMDYDEVQSDRELSPEPQQQGLFDDLEEDADGWRGRERSQTPVYDNDSSMSKAKPRKRLIKKSDAGSQSMAPELADEDEEADGNIPASFVRDESEEGEGRKRKWKDGGSGKKEKRLGSSSKGGSKSGLSKKGFAVKAVKDHDGDVKEMWDTIAGGDSEDDKEGVRTVDDDNFIDDTGVEPALYGSDNEARSPSHYAQAEEGEEEDEIKELFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAEFNRQGKPAINKLKKLPLLTEVLSKKQLQQEFLDHGVLTLLKSWLEPLPDGSLPNINIRTAILNILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEINVNRKLAKELVDKWSRPIFNKSTRFEDMRNVEDDRIPFRRPLVKKPANKASGIESRDGDLDLEFSQRKSGQSSTRQLTTRPEATPLDFVVRPPSKVDPEEVRARAKQAAQDQYRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMTKYL 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0360 904 MobiDBLite consensus disorder prediction 493 528 - -
Lele55g0360 904 MobiDBLite consensus disorder prediction 415 614 - -
Lele55g0360 904 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 633 780 IPR035441 -
Lele55g0360 904 ProSiteProfiles TFIIS N-terminal domain profile. 694 777 IPR017923 -
Lele55g0360 904 PANTHER PROTEIN IWS1 HOMOLOG 1 401 904 IPR044204 GO:0009742|GO:0032784
Lele55g0360 904 MobiDBLite consensus disorder prediction 436 450 - -
Lele55g0360 904 MobiDBLite consensus disorder prediction 821 837 - -
Lele55g0360 904 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 687 777 IPR035441 -
Lele55g0360 904 MobiDBLite consensus disorder prediction 849 865 - -
Lele55g0360 904 MobiDBLite consensus disorder prediction 543 581 - -
Lele55g0360 904 Pfam TFIIS helical bundle-like domain 720 774 IPR017923 -
Lele55g0360 904 MobiDBLite consensus disorder prediction 821 868 - -
Lele55g0360 904 Coils Coil 120 140 - -
Lele55g0360 904 Pfam Protein of unknown function (DUF760) 143 269 IPR008479 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0360 Lele-ChrLele55 2233154 2241173 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele55g0360 DUF760 2e-22 No_clan