Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0350 ATGGCAGCTTCTTGCCCAGTGTACACAGCAACACAATCTCTCAGCACAAAACGCTCCATCTCATCTCCATCAAAATCACATTTGGGTTATTTTGCCCAGAAACATGAGCAGCTAGTGATCTTCAAGGGAAGAACAAGAAGCAGCAGCAGCAGCCCATGTGTGATAACATGTGGTGCAGTAGCAGGAGATCATGATCAGACGGTTGTGATTGGTCTTGCTGCAGATTCAGGCTGTGGAAAGAGCACATTCATGAGAAGACTCACAAGTGTGTTTGGAGGAACAGCGGAACCACCCAAAGGAGGGAATCCAGATTCCAACACTCTCATTAGTGACACAACAGCGGTTATTTGCTTAGATGATTATCATTCATTGGACAGAAATGGAAGGAAAGAGAAAGGAGTCACAGCACTTGATCCAAGAGCCAATGATTTTGATCAAGAGCCAATGATTTTGATCTCATGTTTGCATCCAATGTTTGATGCTCGGGTGAGAGAACTGTTGGACTTCAGTATCTACTTGGACATCAGCAATGAAGTGAAATTCGCTTGGAAAATTCAAAGAGACATGGCAGAGCGTGGACACAGCCTTGAAAGCATCAAAGCTAGCATTGAAGCTCGGAAGCCTGATTTTGAAGCCTTTATTGATCCTCAGAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACTCAGCTCATTCCAAATGATAATGAAGGAAATATTTTAAGAGTGAGGTTAATACAGAAAGAAGGGGTTAAGCATTTTGACCCTACTTACTTGTTTGATGAAGGATCTACCATTTCCTGGATACCATGTGGCAGGAAGCTAACTTGCTCTTATCCTGGCATTAAGTTCTTCCATGGGCCAGAGATTTACTATGGCAATGAGGTAACATTTGTGGAGATGGATGGGCAATTTGACAAACTAGATGAACTGATTTATGTTGAGAGCCATCTCAGTAACCTCTCAACAAAATTCTATGGAGAGGTAACACAACAGATGTTGAAACATCCAGATTTCCCAGGAAGCAACAATGGCACAGGTGTTTTCCAGACCATAATTGGTTTGAAGATCAGAGATTTATATGAACAAATAATAGCCAGCAGGGCTAAGACTCCAGTAGGAGCAGCACAAGCCTAG 1140 0.4263 MAASCPVYTATQSLSTKRSISSPSKSHLGYFAQKHEQLVIFKGRTRSSSSSPCVITCGAVAGDHDQTVVIGLAADSGCGKSTFMRRLTSVFGGTAEPPKGGNPDSNTLISDTTAVICLDDYHSLDRNGRKEKGVTALDPRANDFDQEPMILISCLHPMFDARVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAFIDPQKQYADAVIEVLPTQLIPNDNEGNILRVRLIQKEGVKHFDPTYLFDEGSTISWIPCGRKLTCSYPGIKFFHGPEIYYGNEVTFVEMDGQFDKLDELIYVESHLSNLSTKFYGEVTQQMLKHPDFPGSNNGTGVFQTIIGLKIRDLYEQIIASRAKTPVGAAQA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0350 379 PANTHER URIDINE KINASE 53 294 - -
Lele55g0350 379 ProSitePatterns Phosphoribulokinase signature. 184 197 IPR006082 GO:0005524|GO:0005975|GO:0008974
Lele55g0350 379 Gene3D - 147 268 IPR027417 -
Lele55g0350 379 Gene3D - 64 146 IPR027417 -
Lele55g0350 379 CDD PRK 69 324 - -
Lele55g0350 379 Pfam Phosphoribulokinase / Uridine kinase family 69 146 IPR006083 GO:0005524|GO:0016301
Lele55g0350 379 Pfam Phosphoribulokinase / Uridine kinase family 149 233 IPR006083 GO:0005524|GO:0016301
Lele55g0350 379 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 304 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0350 Lele-ChrLele55 2187489 2190496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0350 32 225 PRT Gene Family AT3G27190 25.366 6.23e-10 58.5