Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0331 ATGGTGAGGTTGAAGCATCCGAAGAAAAAGCAATCTGAAAACAGAAGACCGAAACATTTACTTGACTCGGCGTGTGGCTGTGTTGAGTCTCAGAGGGACAAAGAACAAGAAGCAGTTGAGGTTTGCTTGAACCATTTTGTTTCCCTTGAAGATAATAGATGGGAACTGTACTTTCTTTCTAGTTGCATTCTAACTTCTTGAAGGAGAGAAAAGGTTGTAAAAGTAAAAATGTTTACATGCATAGCGTGTACAAAGAAATTGGCGGAGGAGAGGGAAGTTGAAGGAGGAGCCCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACGACGCAGATAAAGGATATGGCACTTAAGTTTTCAGGTGCCTATAAGCAATGCAAACCGTGCACAGGATCCAGTAGTTATAAGAAAGGGCAGAGACCTTATCCAGATTTTGATACCATCTCTGAAGGAGTTCCATACCCTTATATAGGAGGGGCAAGCTCTAGTTCAACCCCTGCATGGGACTTCATCGGATCCCATTACCCGGCTGGTAGATCTGACCAGAGATTTGTTGGGCCATTTTCTGGTGACCAAACCCCAAGAGGTCGCGAATCGGCATCAGCCTGTGATGTAGTGTTGGAAAAAGAGGATGAACCCAAGGAGTGGATGGCACAGGTAGAGCCAGGGGTTCACATTACATTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTCGATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTACGATCGAATCATGGAGCTCTATAATGTCCAGAGATTCAATCGACAAATCAACACTCCTTCAAGATCTGAAGATGAGCAAAGAGATTCTTCTTACTCGAGACTGGGATCTGCAAGAGACAGCCCCATGGGCTCATCATTAAACAAAGAATGGACGCCAAGGAACTATCCTAAAACCGCAGGAACCAGAGGGTACCACCCATCTGAACTGTCGGATCAAGGTGGAGGACCACATTTCCACGGAGGGTCTTCGTTTGAAGCATCCCGTACGACAACCTCTTCTAGAGATGAACCTTCTGTTAGCAATGGCAGTGACACGGAGGCAGAATGGGTAGAGCAAGATGAGCCTGGAGTTTACATTACTATCAGACAGTTACCGGACGGCACAAGGGAGCTTCGACGTGTCAGATTCAGCCGCGAAAAATTCGGAGAGGTACATGCGAAGAATTGGTGGGAGGAGAACAAAGAAAGAATACAAGCTCAATACCTTTGA 1284 0.4611 MVRLKHPKKKQSENRRPKHLLDSACGCVESQRDKEQEAVEVCLNHFVSLEDNRWELYFLSSCILTSXRREKVVKVKMFTCIACTKKLAEEREVEGGARESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSYKKGQRPYPDFDTISEGVPYPYIGGASSSSTPAWDFIGSHYPAGRSDQRFVGPFSGDQTPRGRESASACDVVLEKEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFDKWQAQRWWGENYDRIMELYNVQRFNRQINTPSRSEDEQRDSSYSRLGSARDSPMGSSLNKEWTPRNYPKTAGTRGYHPSELSDQGGGPHFHGGSSFEASRTTTSSRDEPSVSNGSDTEAEWVEQDEPGVYITIRQLPDGTRELRRVRFSREKFGEVHAKNWWEENKERIQAQYL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0331 427 PANTHER PROTEIN BREVIS RADIX-LIKE 1 77 427 IPR044532 -
Lele55g0331 427 Pfam Transcription factor regulating root and shoot growth via Pin3 371 426 IPR013591 -
Lele55g0331 427 Pfam Transcription factor regulating root and shoot growth via Pin3 218 272 IPR013591 -
Lele55g0331 427 MobiDBLite consensus disorder prediction 298 319 - -
Lele55g0331 427 Pfam Transcription factor BRX N-terminal domain 99 133 IPR027988 -
Lele55g0331 427 MobiDBLite consensus disorder prediction 283 297 - -
Lele55g0331 427 MobiDBLite consensus disorder prediction 282 379 - -
Lele55g0331 427 ProSiteProfiles BRX domain profile. 218 273 IPR013591 -
Lele55g0331 427 MobiDBLite consensus disorder prediction 348 371 - -
Lele55g0331 427 ProSiteProfiles BRX domain profile. 372 427 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0331 Lele-ChrLele55 2074904 2080143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0331 76 427 Major Intrinsic Protein MIP AT1G31880 67.318 1.29e-163 462