Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0329 ATGGAGAGGTACAAGTTAATCAAGGAAGTCGGTGATGGAACATTTGGGAGTGTTTGGAGAGCTCTTAATAAGCAAAATGGTGAAGTTGTTGCTATCAAGAAGATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAATCATTACGGAGAATGAATCATCCAAATATTGTCAAGCTAAAGGAAGTTATTCGAGAAAATGGCATTCTGTACTTTGTTTTTGAGTACATGGAATGCAATTTGTACCAACTCATGAAAGACAGGGAAAATATGTTTTCTGAAAGTGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAGGCTCTTGCATACATGCACCAACGTGGATACTTCCATCGTGACCTGAAGCCAGAAAATTTGCTGGTTTCCAAGGATATCATAAAGATTGCTGATTTTGGTCTTGCCCGTGAGATCAGTTCGCAACCGCCGTACACTGAATATGTCTCCACTCGGTGGTATCGTGCCCCTGAAGTGCTGCTTCAGTCTTACTTGTATACCTCAAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTCACACTCCGTCCTCTTTTTCCGGGTGCCAATGAGGCAGATGAGATCTACAAAATATGTGGTGTGATAGGCAGTCCAACCGTTGAATCCTGGACTGAAGGACTTAAACTAGCAAGGAATATTAACTATCAGTTCCCACAGCTTCCTGGGGTACATCTTTCTACCCTGATCCCATCTGTTAGTGTTGATGCAATCAGCCTTATTACATCACTTTGTTCATGGGATCCTTGCAAGAGGCCGACAGCTGCAGAGGCCCTTCAACATCCTTTCTTTCAGAGTTGCTTTTACATTCCTCCATCCCTCCGCACCAAAGCAGTAGCGAGGACGCCTCCATCTGCTGGAACAAGGGGATCACTGGATCGGCAAGGGGTTAAGAGATATTCCTGCACTTTGTCTAATTCAAAGCTCACCAATAACCATTCCTCCCCAAAGTTACATCCTTCCTTAGCTACAGGTGTACATCGGAAGCTAGATATGGCAAATGAGGATGGAAATAAGACTGACAAGTCCTTGAAGAATACCAAACAACCCAAATATCGACCACCAGGAAAGGACAGCCCAACTTCAATGAACAAGGGAAGGACTAGTACTGTGCGTGGGGTTTCGGAAACAGCTGATAAGTTGGCTAATATGGCGGTTAGTGCTCGAAGACAATCAATGGGTGCTCCTCCCATGAAAGCCGGAGGGCATTGGTTTACTGCACCTCGAAACTTTCTGCTGAGGTCCGCCCAAGATATTCCAGCTGCAAGAGCTTACTCCAGGAAAGTTGCGGGATGA 1353 0.4449 MERYKLIKEVGDGTFGSVWRALNKQNGEVVAIKKMKKKYYSWEECVNLREVKSLRRMNHPNIVKLKEVIRENGILYFVFEYMECNLYQLMKDRENMFSESEVRNWCFQVFQALAYMHQRGYFHRDLKPENLLVSKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYTSKVDMWAMGAIMAELFTLRPLFPGANEADEIYKICGVIGSPTVESWTEGLKLARNINYQFPQLPGVHLSTLIPSVSVDAISLITSLCSWDPCKRPTAAEALQHPFFQSCFYIPPSLRTKAVARTPPSAGTRGSLDRQGVKRYSCTLSNSKLTNNHSSPKLHPSLATGVHRKLDMANEDGNKTDKSLKNTKQPKYRPPGKDSPTSMNKGRTSTVRGVSETADKLANMAVSARRQSMGAPPMKAGGHWFTAPRNFLLRSAQDIPAARAYSRKVAG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0329 450 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0329 450 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 340 - -
Lele55g0329 450 CDD STKc_MAK_like 4 283 - -
Lele55g0329 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lele55g0329 450 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Lele55g0329 450 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0329 450 MobiDBLite consensus disorder prediction 352 393 - -
Lele55g0329 450 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Lele55g0329 450 Gene3D Transferase(Phosphotransferase) domain 1 83 288 - -
Lele55g0329 450 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Lele55g0329 450 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Lele55g0329 450 MobiDBLite consensus disorder prediction 352 371 - -
Lele55g0329 450 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Lele55g0329 450 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0329 Lele-ChrLele55 2070087 2073582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0329 1 290 Core Cell Cycle Gene Families AT3G48750 36.242 1.86e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lele55g0329 Pkinase 1.3e-74 CL0016