Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0321 ATGGCATATGATTCCGATAGCCCCTCACAAGATGGGAGGGATGAAGATGATGATGAAGAATATGAGGACGCTGGCCAGGGCAACCGTTTTCTGGGATTCATGTTTGGAAATGTTGATAATTCTGGTGATCTTGATGTTGATTACCTTGATGAGGATGCAAAGGAGCATCTTTCTGCACTTGCTGACAAGCTGGGTCCTTCCCTGACAGATATAGATTTGTCAGGAAAATCGCCACAAACACCACCTGATATTGTCGAACAAGACTATGGTGAGAAAGCTGATGGTGCAGTTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACAGAAGTTGCAAATGAAGAGGAACATTTATTGCCCAAAAAGGATTTTCTTTCTGTTGAAGCCTCTCTTGAAGCTTTGAAATCCAGATCTTCTGTCTTTGATGATGAAAATTATGACGAGGAATCTGAAAAGGAGCAAGACTTTGTGAATGACACTTCTGAAGTTAATAACATCTCTTCAACTGGGGAGCTGGTAGTGTCTCTCGTTGATGCATCTGAAGGAGAGAAAAGTCAAGAACTTGAATCCCATGATGGCTCACAGCAGTCTGAAGAATTGGACACTGACTTGCAAAAACTCCAGGAGGAAGGGCCTGAAGTTTTGAAAGGTTCTACTCCATTGCCTGTTTTATGTGTTGAAGATGGGATGGTCATTTTAAGGTTCTCTGAGATTTTTGGTATTCATGAACCTTTGAGAAAAGGAGGGAGGAGAGAGCAACGACCTTCTATTCCTAGAGATAGATTCAAGTCCTTAAATGTATCTGATATTGTAGAAGAGGATGAAGAGGCATTCTTCAGGGGTTCCTCTCACAGTCTCCTACTAAATAAACAGGCTTGTGTAGTTCAAAATGGTATATCAGAAAGCAGTGATGCAGACTTGTATTTATCAAAATTTGGATTTCTTAATGGGGCTGCCTCAATGACTGTGAAAGATGGCCCACAACAGAAGGACTCTTGTCTTAGTGCTGAACCAATGAAACAGGATTGCTCAGGCCTTGCTTGGGAAGGGCATTCTCTCTTGTGTGCTGATTTTTATCCCCTTGATCAGCAAGAGTGGGAAGATGAAATCATTTGGGGCAATTCCCCTGCTGCAAGTAACAATAATCATGAGAGCGCTGAAATTTCTGGATCTGCATTGGGACCTCTAGGGTGTGATGAAGGAGATATTGAAAGTGGGATGCAAAATATCCAGTTGGAGCCGCCGAAGGAATTGGAAGAAAAAAATCGTAGTGTTTTCTTGTGCAGCTCGCCTGTCTCATTAGAGCCCTTTGGTTCAAGGGATTCTTCAGGAGCTAAAACCAATTCATTGTCAAAGAATCTATTTCATCCGCAACTCTTAAGGTTAGAATCCAGACCTGAAGTGGATATCTCTAATCCTGCAGATGACGGAAGGGAGAATATATCTGAGGAGCCTAATCAAAATGGCCTAGTAAAGCATTTCACCAAACTGAAATTGCAAAACCAGGATATGATGGAAGGGTCTTGGTTAGACAAGATTATATGGGAGGAGGTCAATAGACCTATTGTGAAACCAAAGCTAATCTTTGATCTTCAGGATGATCAAATGCACTTTGAAATTTTGGATAGTAAGGATGGTAGACATCTCCGCCTGCATGCAGGGGCAATGGTTTTAACTCGTCCTTTAAAATCAAGCAATGGAGATTCTTCTGAGCTACTTGGACATGGAAATCAGCATGGATGGAGATCCATTGCTAATGATAAACATTATTCAAACAGGAAAACTTCCCAGCAACTGAAATCAAATTCTAAAAAACGCTCAGCTCATGGTGTAAAAGTTTTTCACTCTCAACCTGCGCTGAAGCTTCAGACAATGAAATTGAAACTGAGCAACAAAGATATTGCCAATTTTCACCGACCACGAGCTTTATGGTATCCTCATGACAATGAGATGGCTGTCAAAGAACAAGGGAAACTGCCAACACAAGGACCGATGAAAATTATCATGAAGAGCTTGGGTGGCAAGGGGAGTAAACTGCATGTTGATTCCGAAGAAACTCTCTCTTCTGTTAAAGCAAAAGCATCTAAAAAGCTAGATTTCAAACCATTGGAAACAGTGAAAATATTTTATCTTGGGAAGGAACTTGAAGATCAGAAATCACTTGCTGCACAAAGCGTTCGACCAAATTCCTTGTTACATCTTGTTCGTACAAAGATACATTTGTGGACTAGGGCACAAAGGGTTCCTGGTGAGAACAAATCCTTGCGTCCACCTGGGGCATTCAAGAAAAAGTCTGATCTATCTGTTAAAGATGGACATGTTTTTCTAATGGAGTACTGTGAGGAAAGACCTTTATTATTGAGCAATGCTGGAATGGGTGCCAGACTTTGCACATACTATCAAAAATGTTCTCCAGATGATCAAGGTGGCTCTTTATTACGCAACACAAATAGTAGCTTGGGGCATGTGATTTCACTGGATCCTGCTGATAAATCTCCATTTCTTGGAGATTTAAAACCTGGCTGCAGTCAGTCATCACTGGAGACAAACATGTATAGGGCACCCATATTTCCTCATAAAGTGGCATTAACCGACTACCTGCTAGTTCGGTCATCGAAGGGAAAGCTATCATTAAGACGGATTGATAAAATTAACGTTGTTGGACAGCAGGAGCCTCTTATGGAGGTATTGTCACCTGGAAGTAAGAATCTTCAGACATATATGATGAACAGGCTACTGGTACACATGTGCCGTGAATTTCAAGCTGCAGAGAAGCGACACTTACCTCCATGCATTCGTGTTGATGAGCTGCTGTCGCAGTTTCCTTACCTATCAGAAGCTTCTTTGCGCAAGAAAATTAAGGAATATGCTATTTTACAGAAGGGAACAAATGGACAATCGATTTTGGTTAAAAAGCGAAATTTTCGCATGTGGTCGGAGGATGAATTGAGAAAGATGGTGACGCCAGAGCTTGTTTGTGCTTATGAAAGCATGCAAGCTGGTCTATACCGTCTAAAACATTTAGGAATTACTGAAACTCATCCTACTAATATATCTTCTGCTATGAGTCGGCTTCCTGCTGAAGCAATTGCACTGGCTGCCGCATCGCACATTGAGAGGGAGCTGCAAATCACTCCATGGAACCTTAGTAGCAATTTTGTTGCCTGCACAAGCCAGGGGAAGGAAAATATTGAGCGATTGGAAATTACTGGTGTTGGTGATCCATCTGGGCGTGGTTTGGGTTTCAGCTATGCTCGGGCTCCTCCAAAGGCACCAGTGTCAAGTGCAGTGGTGAAGAAGAAAACAGCTGCTGCCCGGGGTGGTTCCACTGTTACTGGAACAGATGCTGATCTACGCAGATTAAGCATGGAGGCTGCACGAGAGGTGCTTCTTAAGTTCAATGTTCCTGAGGAAGTCATAGCAAAACAAACCAGGTGGCATCGAATTGCTATGATACGCAAACTTTCAAGTGAGCAAGCAGCATCTGGAGTTAAGGTTGACCCAACAACTATTGGCAAATATGCTCGTGGCCAGCGAATGTCCTTTCTTCAGTTACAGCAGCAGACCAGGGAGAAGTGCCAGGAGATTTGGGATCGACAAGTTCAGAGTCTTTCATCTGTGAATGGTGATGAAAATGAGAGTGATTCTGAAGGAAACAGTGACCTAGATTCTTTTGCTGGTGATCTAGAAAATTTACTTGATGCTGAGGAGTGTGAAGAGGGAGAAGAAGGTACCAATGATTTTAAACGTGACAAGACTGATGGCGTCAAGGGTCTTAAAATGAGAAGACGTCCAACCTTAGCCCAGGCAGAGGAGGAAATAGAAGACGAAGCTGCTGAGGCTGCTGAACTATGCAGATTACTCATGGATGATGATGAAGATGAGAGGAAGAAAAAGAAGACTAAATTTGTTGTGGAGGAAGCGGGAATAATTCCAAAACTACAGCCAAGATTCGTCTTTGACAATACAGATCAGGAGGATGGCATTTCTGCTAAAAAAGGCAAATCAGTGAAGGTCAATAAAACTAAGAAGACTGACCTTTCACCTATTAGTGTGGCAAATAAGAAAATAAAGTTAAATATTGGGGAACCGCCAAAGGTATTCAAGGAGAAAAAGCCATCAAGGGAAAGTTTTGTTTGTGGAGCGTGTGGCCAGCTTGGGCACATGAGAACAAACAAGAACTGTCCAAAATACGGTGAAGATCCAGAAGCACAACCTGAATCTACAGACGTGGAAAAAACGGGTGGAAAATCAAGCTTGTTGGATCATTCTGGTCAGTCCCAGCATAAAGCCGTTTCCAAGAAGCTTATTTCAAAAAGCTCATCAAAAATTGCTCTGGTTGAAGCTTCTGAGGGAGAAAAATCTGGTTTGAAGACGAAAGTTCTTCCAGTGAAGTTCAAATGCAGCTCCACGGAAAAACCTGTTATTGAACCCACACAGAGCTCTGATAAGCCAGTCACTTCTGACTCTGAAACTGCCAAGTCTGCTAAGATTAGTAGAATCTTAATTCCCAAGAAAGTGAAATCAGATGATATGCAAGCCGAGTCTCGTAAACATTCCATTGCTATACGCCCTCCGGCTGATCCAAGTAGAAGTCAAGTTGAGTCTCATAAGCCGTCAATTAAAATTCGACCACCTACTGAAACGGATAGGGAGCAGCCCCAAAAGAAAATTATTATAAAACGCACGAAGGAAGTTATTGATCCAGATCAATTCAGTCCTAGTGAAAACATGGGATTTGAGCACAGAAAAACGAAAAGAATTGTTGATTTGTCAAATTTTGAGAAGCACAGAAAACAGGAGACCATGTATAGATCTGAAGCCGCACTGGCAAAGCAGAAAGCTAAAGAGGATAGAAGATGGTGGGATGAGCAAGAGAAAAGGAGAAAAGAAGAAAGACTCCGAGAAGAACGGGCAAGGAGGCTTCACGAGGAAGAAATGAGGATGCTAAAAGAGCAAGAAAGGTTAGCTGAGTTAAAAAGATACGAAGAAGATATTAGGAGAGAGAGGGAGGAGGAAGAACGGCAGAAAGCGAAGAAGAAGAAGAAGAAAAAGGCTGCTGAGTTTAGAGACGAGTATATAGATGATCACAGAACAAGATTTAATAACAGGGTGTTAGAAAGAGAACGGAGTGGGAAAAGGAGATCTGTTGTTGAGTTGGGAAGGTATGCAGCCGAATATACTCCGCCACCAAAACGGCGCAGAGGTGGAGGGGGAGAGGTTGGTTTGGCAAATATTTTGGAACGCGTTCTTGAGGCGCTCAAAGATCGATATGACCTGTCATACCTTTTCTTGAAACCAGTGTTGAAGAAAGAGGCTCCCGACTACCTGGACATTATCGAGAGGCCGATGGATCTTTCAAGAATCAGGGAAAGGGTGAGGAATATGGAGTACAAAAGCCGGGAAGATTTCAGACACGATGTGTGGCAGATTGCATATAATGCCCACAAATATAACGATGGGAGAAACCCAGGAATTCCTCCTCTTGCTGATCAGCTTTTAGAGCTTTGTGATTATTTGTTGAACGAGAATGATGATAGCCTAACTGAAGCTGAAGCTGGTATTGAAACTAGGGATTTCTAG 5589 0.4237 MAYDSDSPSQDGRDEDDDEEYEDAGQGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPPDIVEQDYGEKADGAVDYEDIDEEYDGPETEVANEEEHLLPKKDFLSVEASLEALKSRSSVFDDENYDEESEKEQDFVNDTSEVNNISSTGELVVSLVDASEGEKSQELESHDGSQQSEELDTDLQKLQEEGPEVLKGSTPLPVLCVEDGMVILRFSEIFGIHEPLRKGGRREQRPSIPRDRFKSLNVSDIVEEDEEAFFRGSSHSLLLNKQACVVQNGISESSDADLYLSKFGFLNGAASMTVKDGPQQKDSCLSAEPMKQDCSGLAWEGHSLLCADFYPLDQQEWEDEIIWGNSPAASNNNHESAEISGSALGPLGCDEGDIESGMQNIQLEPPKELEEKNRSVFLCSSPVSLEPFGSRDSSGAKTNSLSKNLFHPQLLRLESRPEVDISNPADDGRENISEEPNQNGLVKHFTKLKLQNQDMMEGSWLDKIIWEEVNRPIVKPKLIFDLQDDQMHFEILDSKDGRHLRLHAGAMVLTRPLKSSNGDSSELLGHGNQHGWRSIANDKHYSNRKTSQQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPRALWYPHDNEMAVKEQGKLPTQGPMKIIMKSLGGKGSKLHVDSEETLSSVKAKASKKLDFKPLETVKIFYLGKELEDQKSLAAQSVRPNSLLHLVRTKIHLWTRAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGARLCTYYQKCSPDDQGGSLLRNTNSSLGHVISLDPADKSPFLGDLKPGCSQSSLETNMYRAPIFPHKVALTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRLLVHMCREFQAAEKRHLPPCIRVDELLSQFPYLSEASLRKKIKEYAILQKGTNGQSILVKKRNFRMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPAEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERLEITGVGDPSGRGLGFSYARAPPKAPVSSAVVKKKTAAARGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSSVNGDENESDSEGNSDLDSFAGDLENLLDAEECEEGEEGTNDFKRDKTDGVKGLKMRRRPTLAQAEEEIEDEAAEAAELCRLLMDDDEDERKKKKTKFVVEEAGIIPKLQPRFVFDNTDQEDGISAKKGKSVKVNKTKKTDLSPISVANKKIKLNIGEPPKVFKEKKPSRESFVCGACGQLGHMRTNKNCPKYGEDPEAQPESTDVEKTGGKSSLLDHSGQSQHKAVSKKLISKSSSKIALVEASEGEKSGLKTKVLPVKFKCSSTEKPVIEPTQSSDKPVTSDSETAKSAKISRILIPKKVKSDDMQAESRKHSIAIRPPADPSRSQVESHKPSIKIRPPTETDREQPQKKIIIKRTKEVIDPDQFSPSENMGFEHRKTKRIVDLSNFEKHRKQETMYRSEAALAKQKAKEDRRWWDEQEKRRKEERLREERARRLHEEEMRMLKEQERLAELKRYEEDIRREREEEERQKAKKKKKKKAAEFRDEYIDDHRTRFNNRVLERERSGKRRSVVELGRYAAEYTPPPKRRRGGGGEVGLANILERVLEALKDRYDLSYLFLKPVLKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFRHDVWQIAYNAHKYNDGRNPGIPPLADQLLELCDYLLNENDDSLTEAEAGIETRDF 1862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0321 1862 Coils Coil 1635 1692 - -
Lele55g0321 1862 Coils Coil 1269 1289 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 1471 1558 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 1393 1437 - -
Lele55g0321 1862 FunFam Transcription initiation factor TFIID subunit 1 649 739 - -
Lele55g0321 1862 SUPERFAMILY Bromodomain 1730 1851 IPR036427 GO:0005515
Lele55g0321 1862 CDD Bromodomain 1748 1843 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 567 613 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 470 484 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 142 162 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 66 92 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 1207 1227 - -
Lele55g0321 1862 Pfam TATA box-binding protein binding 18 61 IPR009067 -
Lele55g0321 1862 CDD Ubl_TAFs_like 667 738 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 469 490 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 184 204 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 379 399 - -
Lele55g0321 1862 Pfam Protein of unknown function (DUF3591) 586 1153 IPR022591 -
Lele55g0321 1862 Pfam Ubiquitin family 671 739 IPR000626 GO:0005515
Lele55g0321 1862 MobiDBLite consensus disorder prediction 1669 1688 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 1 28 - -
Lele55g0321 1862 SMART ubq_7 667 739 IPR000626 GO:0005515
Lele55g0321 1862 MobiDBLite consensus disorder prediction 182 204 - -
Lele55g0321 1862 Gene3D - 15 68 IPR036741 -
Lele55g0321 1862 ProSiteProfiles Bromodomain profile. 1758 1828 IPR001487 GO:0005515
Lele55g0321 1862 MobiDBLite consensus disorder prediction 1537 1558 - -
Lele55g0321 1862 PRINTS Bromodomain signature 1775 1791 IPR001487 GO:0005515
Lele55g0321 1862 PRINTS Bromodomain signature 1791 1809 IPR001487 GO:0005515
Lele55g0321 1862 PRINTS Bromodomain signature 1809 1828 IPR001487 GO:0005515
Lele55g0321 1862 SUPERFAMILY TAF(II)230 TBP-binding fragment 24 62 IPR036741 -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 1413 1437 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 1505 1526 - -
Lele55g0321 1862 Pfam Zinc knuckle 1382 1402 IPR041670 -
Lele55g0321 1862 ProSiteProfiles Ubiquitin domain profile. 667 737 IPR000626 GO:0005515
Lele55g0321 1862 SUPERFAMILY Ubiquitin-like 637 737 IPR029071 -
Lele55g0321 1862 Gene3D - 649 739 - -
Lele55g0321 1862 MobiDBLite consensus disorder prediction 1475 1497 - -
Lele55g0321 1862 SMART bromo_6 1738 1848 IPR001487 GO:0005515
Lele55g0321 1862 Gene3D - 1735 1861 IPR036427 GO:0005515
Lele55g0321 1862 Pfam Bromodomain 1749 1824 IPR001487 GO:0005515
Lele55g0321 1862 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 13 1861 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Lele55g0321 1862 MobiDBLite consensus disorder prediction 592 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0321 Lele-ChrLele55 1990046 2005613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0321 667 737 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 39.437 9.05e-08 52.0