Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0320 ATGGAGCCGTTTTATTTAACTAGAATGGCGTCCCTTACGCGTTTTTTTGATTCCTGCTTTGCCACGGAGGCATTGCCTGATGGAATGTACCAAATATATTTACATGAAATCATTACCGAGTTACATGAAGAATTCCCGGACTCTTCCTTTTTCGCTTTCAATTTTCGTGAAGGGGAGAAACGTAGTCAATTTTCTGAAATTCTTTGTGAATACGATGTTACTGTGATGGATTATCCGCGGCAGTATGAGGGTTGCCCTATTCTTCCGGTGTCTTTGGTTCAACATTTTCTTCGGGTTTGTGAGAGTTGGCTTTCACTTGGAAATCAACAGAATGTTATCCTTCTCCACTGTGAGAGAGGAGGTTGGCCTCTCTTGGGGTTTCTTTTAGCTAGCTTTCTAATTTATAGAAGACTACACAGCGGTGAACGGAAGACACTTGAAATGGTGCATAGAGAGGCACCCAAAGGTTTCTTACAGCTATTGTCGCCTTTGAACCCGTTGCCATCTCAACTTCGTTATGTTCAGTATGTAGCAAGAAGGAACATAGCTCCTGAGTGGCCGCCGCCTGAGAGAGCTCTGTCTCTAGATTGTGTCATTCTCAGAGCCATTCCTAGTTTTGATTCCCAGAACGGATGCAGACCCATGATCCGCATTTTTGGTAGAAATTTTCTCAGCAAGGGTGGGCTTTCTACTCAGATGCTCTATTCCATGCACAAGAAAAAGAAAACCTTAAGGCACTACCGTCAGGTAGACTGTGATGTGATCAAGATTGACATACTATGTTTAGTACAAGGAGATGTGGTATTGGAGTGTGTCCATTTGGACATGGATCCAGAAAGGGAAGTAATGATGTTTCGCGTAATGTTCAACACGGCATTTATTCGATCCAACATATTGATGCTGAATACTGAAAACCTGGACATTCTCTGGGACTCAAAGGAGCGGTATCCAAAAGGCTTCCGAGCTGAGGTTTTGTTTGGGGAGGTTGAAAGCATATCTCCTCCAAAGGCCCCAACAACTGTGTTAAATGGCGAGGAGAAGGGTGGATTGCCCATTGAAGCTTTTTCAAGGGTTCAAGAACTTTTTAGTGGGGTGGAGTGGCTTGACAGTGGTGAAGACGCTGCAGTCTGGTTGCTTAAACAACTTTCTGTGTTAAATGATGTCAAAGAGCTTTCAAGGTTGCAAGGTAAAGCAAGTTGGTACTCATCACCCGCTGAATCTGAAGATGAAAATAATGAATCAAGCACTGCTGATAGTTCGGATGAAGCCTTTGATGTTATTCCAAAGTCTTCTACTTATATTTCCAAGTTATTGGCACCTGACAACCCTGATTCAGTCCATTTAGATTTTGAAATTGATGGTAGAAATAGTGTACACCTTTCTTCAGAACCTCCAGATCCATCGATTGAAAGTGTTCCACTAGACCATCATGCTCTTAGTAATGAATATCCTCACAATTCATCTCCACCCTCACCACCAGCAGCACCTTCTTCACTTTGTCCACCTCTTTCTAATGTCAGTGGAGATCCTTGCACATCTCCTATAGCATCGTCAGCAAATAGCAAGAGCCCAATACCATCCTCTCCGGCACCTCCGCCACCTCCTCCACCATCAAACATTTCAACTTCATCTAATACTAAGCCTCTCCTAGTGGCAAGACCTCCACCACCTCCTCCCTCCCCTCCCGCTCTAGCTCATAATGCTCCTAGAGCCCCTCCACCACCACCTCCTATAGCAAAGCCTTCAAATCCTCCTCTTCCACTTCCACCACCCTCGCCTAGTCAAGGCACAATACCACCTCCACCTCCACCTCCTCCACCACCACCTAATCGAGGTGCAATGCCGCCTCCACCTCCACCTCCACCTCCTCCAACTAGGCGAGATGCAATGCCACCTCCACCTCCGCCTCTTCCACCACCACCTAATCAAGGTGCAACACCACCTCCGCCTTTTCCCCCGCCTCTACCACCTAATCGAGATGCAACGCCACCTCTGCCACTTGGTCGAGGTGCTACACCACCTCCACCTCCTCCTCCGCCACCACCTGGCCGAGGTGCAATGCCGCCACCACCTAGTCTAGACACAAAGCCGCCTCCGCCGTTGCCTAGTCAAGGTGCAGCACCTACTCCACCGCCACCCGGTCGGGGTGCAACACCGCCTCCACCTCCACCACCACCACTTGGTCAGGGTGTAGCACCTCCCCCACCACCACCTAGTCGGGTTGCAGCACCTCCCCCACCTCCGCCACCTGGTCGGGGTGCACCACCACCTCCTCCCCCTCTTGCTTCTAGGGGATCTGGTGTGCCGCCGCCGCCCCCATCCACTGCCAAAGGTAAACCATTAGCATCAACAAATATTGGAAGAGGTCGAGGTTCTAGTGGCACTGCTAATGCCCCTAAGAAAACTTCATTAAAGCCCCTACATTGGGTGAAAGTTAGTCGAGCAATGCAAGGGAGTCTATGGGCTGATTCGTCGAAACAAGATAATCAATCAAGGCCCCCTGAAATTGATATATCAGAACTTGAGACTCTGTTTTCAGCAGCATCTGCTTCCGAGAGCAATGCTAAAGGTGTAGGTCGGCGTGGTTCTAATATCAATAAACCCGAGAAAGTTCAATTGTTACTACTTGCAGTTACTAGGGATGCAAGGTATGGTACTTTAGAGCATGATCATTCTGAATTTGTTATTGACTTGCGAAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCCTTGCCAGACATGCTTAATGCAGTTCTGGCTTTGGATTCTTCTACTTTAGACATTGATCAGGTTGAGAATCTTATCAAGTTCTGTCCTACAAAGGAAGAAATGGAAATGTTGAAGTTCTCATTTCAGAATTACACTGGGAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTCATGGAGTTGATGAAGGTTCCACGAGTTGAAGCTAAATTACGAGTTTTTGCTTTTAAAATCACCTTCTCTAGTCAGGTGAATGATTTGAGAGTAAATTTGAACACAATCAATGATGCCTCTAGGGAGGTGAAAGAATCTATGAAGTTGCGTCAAATAATGCAGACTATTCTTACTTTGGGCAATGCCTTAAATCAGGGAACAGCACGAGGATCTGCAGTAGGATTCAAATTAGATAGCCTTCTTAAATTATCTGATACTCGGGCAAGGAATAACAAAATGACTTTGATGCATTATTTGTGTAAGCTTCTTTCTGAGAAAATGCCAGAATTGGTAGATTTTGGCAAGGATCTCGTCCATTTGGAAGCAGCTTCAAAGATCCAACTAAAAGCACTGGCTGAAGAGATGCAAGCGGTTAGCAAAGGTCTGGAAAAAGTTGAGCAAGAACTTACTGCTTCAGAAAATGATGGTGTTATATCTGCAGGCTTCCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGAAGGAAGAAATGCAGATTCTTTGTCCCAGTACTTTGGGGAGGATCCCGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATCCTGGCTGTCTTCGTTAAGATGTTCAACAAATCAAGGGAGGAGAATGGAAGGCAGGCAGACGCCGAAAAGAAGAAATTGGAGAAAGAAGCCATGAAGGAACAGCGAACACTTGTAAATACAAATTGGAAAAAAGATGTTCGCTAG 3666 0.4577 MEPFYLTRMASLTRFFDSCFATEALPDGMYQIYLHEIITELHEEFPDSSFFAFNFREGEKRSQFSEILCEYDVTVMDYPRQYEGCPILPVSLVQHFLRVCESWLSLGNQQNVILLHCERGGWPLLGFLLASFLIYRRLHSGERKTLEMVHREAPKGFLQLLSPLNPLPSQLRYVQYVARRNIAPEWPPPERALSLDCVILRAIPSFDSQNGCRPMIRIFGRNFLSKGGLSTQMLYSMHKKKKTLRHYRQVDCDVIKIDILCLVQGDVVLECVHLDMDPEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVESISPPKAPTTVLNGEEKGGLPIEAFSRVQELFSGVEWLDSGEDAAVWLLKQLSVLNDVKELSRLQGKASWYSSPAESEDENNESSTADSSDEAFDVIPKSSTYISKLLAPDNPDSVHLDFEIDGRNSVHLSSEPPDPSIESVPLDHHALSNEYPHNSSPPSPPAAPSSLCPPLSNVSGDPCTSPIASSANSKSPIPSSPAPPPPPPPSNISTSSNTKPLLVARPPPPPPSPPALAHNAPRAPPPPPPIAKPSNPPLPLPPPSPSQGTIPPPPPPPPPPPNRGAMPPPPPPPPPPTRRDAMPPPPPPLPPPPNQGATPPPPFPPPLPPNRDATPPLPLGRGATPPPPPPPPPPGRGAMPPPPSLDTKPPPPLPSQGAAPTPPPPGRGATPPPPPPPPLGQGVAPPPPPPSRVAAPPPPPPPGRGAPPPPPPLASRGSGVPPPPPSTAKGKPLASTNIGRGRGSSGTANAPKKTSLKPLHWVKVSRAMQGSLWADSSKQDNQSRPPEIDISELETLFSAASASESNAKGVGRRGSNINKPEKVQLLLLAVTRDARYGTLEHDHSEFVIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSTLDIDQVENLIKFCPTKEEMEMLKFSFQNYTGNKEMLGKCEQFFMELMKVPRVEAKLRVFAFKITFSSQVNDLRVNLNTINDASREVKESMKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLSEKMPELVDFGKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGVISAGFRKVLKNFLDIAEAEGRNADSLSQYFGEDPARCPFEQVTQILAVFVKMFNKSREENGRQADAEKKKLEKEAMKEQRTLVNTNWKKDVR 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0320 1221 MobiDBLite consensus disorder prediction 478 809 - -
Lele55g0320 1221 ProSiteProfiles C2 tensin-type domain profile. 190 329 IPR014020 -
Lele55g0320 1221 Gene3D - 187 332 - -
Lele55g0320 1221 Pfam Formin Homology 2 Domain 798 1183 IPR015425 -
Lele55g0320 1221 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 190 329 IPR035892 -
Lele55g0320 1221 Coils Coil 1183 1210 - -
Lele55g0320 1221 Gene3D Formin, FH2 domain 794 1193 IPR042201 -
Lele55g0320 1221 Coils Coil 1100 1127 - -
Lele55g0320 1221 MobiDBLite consensus disorder prediction 525 541 - -
Lele55g0320 1221 MobiDBLite consensus disorder prediction 778 800 - -
Lele55g0320 1221 ProSiteProfiles Formin homology-2 (FH2) domain profile. 794 1208 IPR015425 -
Lele55g0320 1221 MobiDBLite consensus disorder prediction 399 423 - -
Lele55g0320 1221 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 64 177 IPR029021 -
Lele55g0320 1221 SMART it6_source 461 1219 IPR015425 -
Lele55g0320 1221 Gene3D Protein tyrosine phosphatase superfamily 13 181 IPR029021 -
Lele55g0320 1221 PANTHER FORMIN-J 708 1209 - -
Lele55g0320 1221 SUPERFAMILY Formin homology 2 domain (FH2 domain) 755 1202 - -
Lele55g0320 1221 MobiDBLite consensus disorder prediction 1189 1221 - -
Lele55g0320 1221 PRINTS Proline rich extensin signature 541 557 - -
Lele55g0320 1221 PRINTS Proline rich extensin signature 564 581 - -
Lele55g0320 1221 PRINTS Proline rich extensin signature 490 502 - -
Lele55g0320 1221 PRINTS Proline rich extensin signature 515 536 - -
Lele55g0320 1221 PRINTS Proline rich extensin signature 584 609 - -
Lele55g0320 1221 MobiDBLite consensus disorder prediction 500 524 - -
Lele55g0320 1221 SMART PTEN_C2_2 188 328 IPR014020 -
Lele55g0320 1221 MobiDBLite consensus disorder prediction 550 777 - -
Lele55g0320 1221 Pfam C2 domain of PTEN tumour-suppressor protein 189 327 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0320 Lele-ChrLele55 1980119 1989822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0320 6 434 FH2 protein (formin) Gene Family AT1G31810 73.427 0.0 710