Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0313 ATGAAATGGCAATGGCCATGGCTTCTTTATGTTCTGCTGATATGTCATGTAATCAATAGGAATGAAGCAATCAGTCCTGATGGAGAGGCACTTATTAGCTTCAGGACAGCAGTTTTCCCCAATAGTGACCTGTTACCTTGGAGGCCTGAGGATCCAGACCCATGTAAATGGAAAGGAGTAGCATGTGATCCCAAAACCAAGAGAGTGACAAATCTGTTTCTAGATCATCTTAAGTTAAGTGGGTCTATTTCAGCCGACCTTGGGAAGCTAGAGCATCTGCGGATTCTTGCTCTTAACAACAACAACTTATATGGGACCATTCCATCAGAATTAGGAAATTGCACTGAATTGCAAGAAATATATTTGCATAGTAACTACCTTAGTGGAGTGATCCCAAGTGAAATCGGAAATCTTTCACAACTTCAAAATTTGGATATATCAAGCAACTCCCTTAGTGGAAGTATTCCGGCGCTTGGGAAATTATATAATCTAAAAAATGTCAATGTGTCGTTCAATTTTCTAGTTGGACCAATACCTTTGGATGGTGTGCTTGCCAACTTCACTGAAAGCTCCTTTCTTGGTAATCTTGGTTTGTGTGGAGTGCAAATCAATACAACATGCAAGAATAATGGTTCGCCCAATTCCAATCCTCAATCTTCAACATCAGACCAAAATCAAAATGGAAAAAGGAAAGATTCTGGCCGGCTGCTTATTAGTGCATCAGCAACTGTGGGTGCACTGCTTTTAGTGGCACTTATGTGCTTCTGGGGTTGCTTTCTTTATAAGAAGTTTGGTAAAAATCACAGAGAAAGTCTAGCAATGGATTTCTGTGGAGGGGCATCTATTGTGATGTTTCATGGAGATCTACCATATTCTTCAAAAGATATTATTAAAAAACTAGAGACTTTAAATGAGGAACACATAATTGGTTGTGGAGGATTCGGAAAAGTTTATAGGCTTGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATTGTAAAGTTAAATGAGGGCTTTGATCGATTTTTTGAGAGGGAGCTTGAAATTCTTGGAAGCATAAAACACAGATACCTAGTGAACTTAAGAGGATATTGCAATTCACCTTCATCAAAGTTGTTAATATATGATTACCTACCTGGTGGTAGTCTTGATGAAGCTCTTCATGAAAGATCTGAGCAACTTGATTGGGACTCATGCTTGAATATCATCTTGGGAGCTGCAAAAGGGCTTGCCTACTTGCATCATGATTGTTCCCCTAGGATCGTACACCGTGACATAAAATCAAGCAATATTTTGCTTGACGGAAACTTGGAAGCTCGAGTCTCTGACTTTGGACTTGCCAAACTTCTGGAGGATGAGGAATCTCACATCACTACCATTGTTGCTGGAACATTTGGTTATCTAGCTCCAGAATATATGCAAAGTGGTAGAGCAACTGAAAAGACCGATGTTTATAGTTTTGGTGTCCTAGTACTCGAAGTGTTGAGTGGAAAGCGACCAACAGATGCATCGTTCATTGAGAAGGGCCTCAATATTGTTGGTTGGTTAAATCATTTAATAACCGAAAACAGAGCAAGAGATATAGTTGATCAGCAATGTGAGGGAGTGCAGGTAGAGAGCCTGGATGCGTTACTCTCTGTAGCTATACGGTGTGTATCGTCAAGTCCGGAGGAGCGACCCACAATGCACAGAGTGGTCCAATTGATTGAATCAGAGGTGATGACCCCATGCCCAATTGACTTCTATGACTCCAACTCCGAATAA 1767 0.4052 MKWQWPWLLYVLLICHVINRNEAISPDGEALISFRTAVFPNSDLLPWRPEDPDPCKWKGVACDPKTKRVTNLFLDHLKLSGSISADLGKLEHLRILALNNNNLYGTIPSELGNCTELQEIYLHSNYLSGVIPSEIGNLSQLQNLDISSNSLSGSIPALGKLYNLKNVNVSFNFLVGPIPLDGVLANFTESSFLGNLGLCGVQINTTCKNNGSPNSNPQSSTSDQNQNGKRKDSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNHRESLAMDFCGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGKVYRLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPSSKLLIYDYLPGGSLDEALHERSEQLDWDSCLNIILGAAKGLAYLHHDCSPRIVHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNHLITENRARDIVDQQCEGVQVESLDALLSVAIRCVSSSPEERPTMHRVVQLIESEVMTPCPIDFYDSNSE 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0313 588 Gene3D Phosphorylase Kinase; domain 1 279 378 - -
Lele55g0313 588 Pfam Protein kinase domain 305 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0313 588 ProSiteProfiles Protein kinase domain profile. 303 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0313 588 SUPERFAMILY L domain-like 37 190 - -
Lele55g0313 588 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 379 581 - -
Lele55g0313 588 SUPERFAMILY Protein kinase-like (PK-like) 288 570 IPR011009 -
Lele55g0313 588 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 76 571 - -
Lele55g0313 588 Gene3D Ribonuclease Inhibitor 25 208 IPR032675 -
Lele55g0313 588 SMART serkin_6 303 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0313 588 ProSiteProfiles Leucine-rich repeat profile. 140 162 IPR001611 GO:0005515
Lele55g0313 588 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 277 378 - -
Lele55g0313 588 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 184 - -
Lele55g0313 588 ProSitePatterns Protein kinases ATP-binding region signature. 309 335 IPR017441 GO:0005524
Lele55g0313 588 MobiDBLite consensus disorder prediction 210 227 - -
Lele55g0313 588 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Lele55g0313 588 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Lele55g0313 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Lele55g0313 588 Gene3D Transferase(Phosphotransferase) domain 1 379 576 - -
Lele55g0313 588 MobiDBLite consensus disorder prediction 210 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0313 Lele-ChrLele55 1935854 1940102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0313 1 579 Receptor kinase-like Gene Family AT2G35620 74.182 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lele55g0313 Pkinase 1.3e-46 CL0016