Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0305 ATGAATAGCATCAACGACGACAGTTCCAGACAAGATCTCGACCCTCAAAGTGACCACAGTTCCGACTATTTAGCTCACTCTCTTCCTCTCCAGCCTCAGCCTCGCCGCCCTCGTGGCTTTGCGGCCACGGCGGCGGCAGCTACTGCCGCCCCCAATTCCGCTGGGAAGGGAAAGAAAGAGAGGGAGAAAGAGAAGGAGCGAACCAAGCTCCGAGAGCGTCACCGTCGAGCAATCACTAGCCGTATGCTCGCTGGCCTCCGTCAGTATGGTAGTTTCCCTCTCCCGGCTCGTGCGGACATGAATGATGTGCTTGCCGCGCTCGCCCGCGAGGCTGGTTGGGTTGTTGAGGCAGATGGCACCACCTACCGTCAGTGCCAGCCTCCTTTGCAAATGGCATCATTTGCTGCAAGGACAGTTGAAACTCCACTCTCTGCAGGTTCTTTAAGAGCTTGCGCTACTAAAGAAACACTAGTGAATCAACCACCAGTACTTAGAATTGATGAGAGCTTGTCACCTGCATCCATTGATTCTGTTGTAATTGCAGAGAGGGATTCAAAGAATGAGAAATATCCAAGTGCAAGCCCTATCAATCCAGTCGACTGCTTGGAGGCTGATCAGCTTATGCAGGATATTCACTCTGGGGAGCATGAGAATGATTTCACGGGCACACCTTATGTTCCTGTTTATGTAAAACTTCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGATCCTGAAGGAATTAGACAGGAGCTAATTCACATGAAATCTTTAAATTTTGATGGTGTCATTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCCCACAGAAATATGTGTGGTCTGGCTATAGGGAACTTTTTGACATTGTTAGAGAAATCAACTTTAAGTTACAGGTCGTTATGGCTTTTCATGAATATGGAGGGAATGATTGTAGTGATCCATTGATTGCCCTCCCACAATGGATTTTGGAAATTGGAAAAGGCAACCAGGATATTTTTTTCACAGATCGTGAAGGACGGAGAAATACTGAATGTCTTTCTTGGGGCATTGACAAAGAGAGAGTTCTGAAAGGAAGAACTGGAATCGAGGTCTATTTTGATTTCATGAGAAGCTTTCGGACAGAGTTTAATGACTTGTTTGCGGAAGGCCTCATTTCTGCTGTAGAAATTGGACTTGGGGCATCTGGGGAGCTGAAATATCCTTCTTTTTGGGAAAGGATGGGATGGAGGTACCCTGGTACTGGTGAGTTTCAGTGTTATGATAAATATCTGCTACAAAGTCTACGAAGAGCAGCCAAATCACGTGCCCACTCTTTTTGGGCTAGAGGACCTGATAATGCTGGACAATACAATTCTGTGCCACGTGAAACTGGATTCTTTTGTGAACGGGGTGATTATGACAATTATTATGGCCGCTTCTTCTTGCATTGGTATGCCCATTCGTTAATAGACCATGCAGATAATGTTTTGTCTCTTGCAAGCCTGGCTTTTGAGGAAACAAGACTAATTGTCAAGGTTCCTGCTGTATACTGGTGGTACAAGACTACTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAACCCTACAAACCTGGATGGATACTCTCCTGTTTTTGAGGTTCTGAAAAAACATGGTGTGACCATGAAGTTTGTCTGCTTAGGATTTCAGCTTTCTAGTCAGGAAACGGACGAGTCATTGGCTGACCCCGAGGGCTTGACTTGGCAGGTATTGAACTCATCCTGGGATCAGGGGTTGATAGTAGCTGGAGAGAACGCGATACCATGTTATGAGAGAGAAGGCTTCAAGAGGCTAGTTGATATAGCGAAGCCAAGAAATGATCCTGATCGCCACCACTTTTCATTTTTTGCATATCAACAACCTTCCATGGTTCAGGGGAATATTTGCTTACCAGAGTTGGATCACTTCATCAAATGCATGCATGGTGACATTACGGGGGATCTGTAA 1977 0.4588 MNSINDDSSRQDLDPQSDHSSDYLAHSLPLQPQPRRPRGFAATAAAATAAPNSAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGSFPLPARADMNDVLAALAREAGWVVEADGTTYRQCQPPLQMASFAARTVETPLSAGSLRACATKETLVNQPPVLRIDESLSPASIDSVVIAERDSKNEKYPSASPINPVDCLEADQLMQDIHSGEHENDFTGTPYVPVYVKLPAGIINKFCQLIDPEGIRQELIHMKSLNFDGVIVDCWWGIVEGWSPQKYVWSGYRELFDIVREINFKLQVVMAFHEYGGNDCSDPLIALPQWILEIGKGNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDFMRSFRTEFNDLFAEGLISAVEIGLGASGELKYPSFWERMGWRYPGTGEFQCYDKYLLQSLRRAAKSRAHSFWARGPDNAGQYNSVPRETGFFCERGDYDNYYGRFFLHWYAHSLIDHADNVLSLASLAFEETRLIVKVPAVYWWYKTTSHAAELTAGYHNPTNLDGYSPVFEVLKKHGVTMKFVCLGFQLSSQETDESLADPEGLTWQVLNSSWDQGLIVAGENAIPCYEREGFKRLVDIAKPRNDPDRHHFSFFAYQQPSMVQGNICLPELDHFIKCMHGDITGDL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0305 658 Pfam Glycosyl hydrolase family 14 244 629 IPR001554 GO:0000272|GO:0016161
Lele55g0305 658 MobiDBLite consensus disorder prediction 1 72 - -
Lele55g0305 658 SUPERFAMILY (Trans)glycosidases 220 654 IPR017853 -
Lele55g0305 658 MobiDBLite consensus disorder prediction 55 72 - -
Lele55g0305 658 Gene3D Glycosidases 216 656 - -
Lele55g0305 658 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 161 652 IPR001554 GO:0000272|GO:0016161
Lele55g0305 658 Pfam BES1/BZR1 plant transcription factor, N-terminal 55 201 IPR008540 -
Lele55g0305 658 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 260 274 IPR001554 GO:0000272|GO:0016161
Lele55g0305 658 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 503 519 IPR001554 GO:0000272|GO:0016161
Lele55g0305 658 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 396 418 IPR001554 GO:0000272|GO:0016161
Lele55g0305 658 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 520 531 IPR001554 GO:0000272|GO:0016161
Lele55g0305 658 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 538 561 IPR001554 GO:0000272|GO:0016161
Lele55g0305 658 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 576 598 IPR001554 GO:0000272|GO:0016161
Lele55g0305 658 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 281 299 IPR001554 GO:0000272|GO:0016161
Lele55g0305 658 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 469 488 IPR001554 GO:0000272|GO:0016161
Lele55g0305 658 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 303 324 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0305 Lele-ChrLele55 1898507 1903451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0305 12 654 Glycoside Hydrolase AT5G45300 66.368 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele55g0305 Glyco_hydro_14 1.6e-83 CL0058