Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0302 ATGACTGGCATTCCCGCCATTTCTTGCCTCAGTCTATCATTTGGCGCTTCGGCTGTGAACAGCGGGGCAGCTGAAACTCTCTCCGGCAAGAGTTGGCTTCACGGTTTGACAGCGAATATGCAAGTTGTTCGATCTCACGTCCATCGGAGTATCTCCACTAATGAAGCTGTTAACACCCTTCCACTCTATCGTTCTGCACCACCGCTTGAAGTCAGGCTCGAGGATTTCGAGCTATACGCCATGGATCGTCTTCGAGTTCTCAAGGGGATTTCAGATTGTTTATCTCGGGGAAAGAAACCAGAAGAAATGGATCAATTAGTAAACAATCTATGGAAAGCACATATGAGGCATCAACAGGCATCTGAAGTTGTAAATAAGGATATTATATCTCATTTTGTTCTTCGGCTTGTGTATTGCCGAACTGAGGACTTGAGGAAATGGTTCCTATCTATGGAAACTTCACTATTTCGCTACCGGTTTCGTCTTGAAAATGCTGAAGCTCAGAGGGCAATCATGGCAGAATTTGACCTTCCTTACAAGGCTGTTAGCCATGTGGAATTTGAGAGTGTGAAGGACAAATTGGAACAAGTTACACGGTCCATTGGCCTGCCTCTACGTGACAATGACGCTATATTCTACAAGGTACCATTTGAAGAAGTTCCAGAGCTTGTGGCTGGTCGGAAAGTATTTATAAATCAAGGTTATGCTTATGTTGGAATGAATCAGGTTGTCTCATTGGTAGCCACACTATTCCGGAGTCAGCTATCCAAGGCACTCATACTCACAAACAGAAAATGGACATCTACAGTTAGAGAACAAGAAAAAGATAGATTGGCTCCTATTGTGGAAGGCCTGTGCTCAAGTTATCTAGGTCCTGACTATTCTCAGCCAAGAGAGTATGCTCAGATATCATTAAAGGACATTGATCAAGTTGCTAAGAGTTCATTTCCATTGTGCATGCGTCATCTATTTGAAAAGCTGAGAGAGGATCACCATTTAAAGCATGGAGGGAGGATGCAACTAGGTCTCTTTCTGAAGGGTGTTGGTTTGAATCTGGATGAGGCACTTGCATTTTGGAGACATGAATTCTCTCAAAAGGTTGGTCTGGAGAGGTTTGAGAAAGAGTATGCATACAGCATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGACTATAGTCCCTATTCTTGTCAAAAGGTTATTTCATCAACTCCTGGTGTTGGAGATCATCATGGATGCCCCTATCGACACTTCAGTGAGGAGAATCTTAGAGCTGCTCTTAACAGAATGGGGGTGAATGGTCGAGCAATTGAAGACGTAATGGACAAAGTACGAAATAGACATTATCAGCTGGCTTGCACCCTGACATTTGAAGCTATTCATGGCAAGCAATGTGATGCGGGGATTAACCATCCAAATCAATACTTCAGTGACAGCCAAAAGATATTGAAGCCTAAGGTTTATGGGTACGCAAGATCCTCAGAGCGCATCATGATTTTCAAGATCTACTGCTTTCCTGACTTGAGGCGTTGA 1536 0.4342 MTGIPAISCLSLSFGASAVNSGAAETLSGKSWLHGLTANMQVVRSHVHRSISTNEAVNTLPLYRSAPPLEVRLEDFELYAMDRLRVLKGISDCLSRGKKPEEMDQLVNNLWKAHMRHQQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETSLFRYRFRLENAEAQRAIMAEFDLPYKAVSHVEFESVKDKLEQVTRSIGLPLRDNDAIFYKVPFEEVPELVAGRKVFINQGYAYVGMNQVVSLVATLFRSQLSKALILTNRKWTSTVREQEKDRLAPIVEGLCSSYLGPDYSQPREYAQISLKDIDQVAKSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLNLDEALAFWRHEFSQKVGLERFEKEYAYSIRHNYGKEGKRTDYSPYSCQKVISSTPGVGDHHGCPYRHFSEENLRAALNRMGVNGRAIEDVMDKVRNRHYQLACTLTFEAIHGKQCDAGINHPNQYFSDSQKILKPKVYGYARSSERIMIFKIYCFPDLRR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0302 511 FunFam DNA primase large subunit 44 285 - -
Lele55g0302 511 Pfam Eukaryotic and archaeal DNA primase, large subunit 212 477 IPR007238 GO:0006269
Lele55g0302 511 PIRSF DNA_primase_large 35 497 IPR016558 -
Lele55g0302 511 CDD PriL_PriS_Eukaryotic 62 480 IPR016558 -
Lele55g0302 511 PANTHER DNA PRIMASE LARGE SUBUNIT 55 487 IPR007238 GO:0006269
Lele55g0302 511 Gene3D - 33 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0302 Lele-ChrLele55 1879002 1885749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0302 40 488 Core DNA Replication Machinery Family AT1G67320 66.324 0.0 673