Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0287 ATGACCATTGATATGCCTTCGCCCTTGACCCAAAGTATGAGGACAAGCAGACCTTCATTTAGTTCTAGTAATGGCTACGATGATGCCCCTCTTCACATTCATGCTGGAGTTAGCAATGGCGATGACTATGACAGTGATAGCTCCAATTTTGCACCACCCACACCTTCAACTATAACAATGTCTATTCCAGCAGAACTAGCTGGAGCTGTGCCCTTGATGGATAGATTCCAGGTGGAGGGGTTTCTAAGATTAATGCAGAAACAAATTAATTCTGCTGGGAAACGTGGATTTTTTTCTAAAAGATCTGTAGGTCCTCAAGTTCAAGAGAAGTTTACATTTGAGGACATGTTGTGTTTCCAAAAGGATCCTATACCCACATCATTGCTTAAGATTAATGGTGATATGGTAAGCCGGGCAACTAAACTATTCCAGATCATTTTGAAGTATATGGGAGTAGATTCACCTGAACGAGTAAATCCAATAAGTTTAGATGAAAGGGTCGAGCTTGTAGGTAAAGTATACAAGCACAGTTTGAAGCGTTCAGAACTCCGAGATGAACTTTTTGTTCAATTATCAAAACAGACCAGAAATAACCCTGAGAGGCAATACTTGATTAAGGCATGGGAGCTGATGTATTTATGTGCATCATCCATGCCACCTAGTAAAGACATTGGAGGATATTTGTCTGAATATGTTCATAATGTGGCCCACAATGTGACCACTGATGCTGAAATCCAAGCCCTTGCAATAAATACATTAAATGCTCTTAAGCGTTCTGTCAAAGCCGGTCCTAGACATATTATGCCTGGACGCGAGGAGATTGAAGCTTTGTTAACTGGGAGAAAGCTTACAACTATAGTGTTCTTCTTGGATGAAACTTTTGAAGAAATCACTTATGACATGGCAACTACTGTTGCTGATGCTGTTGAGGAGTACGTTGGGTTGGATGACAACAAATATATTGGTGACCTCTTGGCAGAATTTAAGGCAGCAAAAGATCGAAGCAAGGGAGAAATCTTGCAATGTAAACTTATATTTAAGAAAAGGCTATTTCGGGAATCAGATGATGCTGTGGCAGATCCTATGTTTGTTCAATTATGCTATGTACAATTACAACATGATTATATCTTGGGTAATTATCCTGTTGGAAGAGATGATGCTGCCCAACTGTCTTCATTGCAAATTTTGGCTGAAATTGGATTTGTTAGAGCACCTGAGACTTGCACAGATTGGGATTCACTTTTGGAGAGGTTTCTACCTAGACAGATTGCAATTACTCGAGCTAAACGGGAATGGGAGCTGGACATCCTTTCTCGCTATCATTCATTGGAACATCTGACAAAAGATGAAGCAAGACAACAGTTCCTTCGCATATTGAGAGCACTTCCTTATGGGAATTCTGTTTTCTTTCATGTTCGCAAAATTGATGATCCTATTGGACTTCTACCTGGAAAAATAATATTGGGCATTAACAAAAGAGGGGTTCATTTTTTCCGTCCTGTTCCAAAGGAATACCTTCACTCGGCTGAGTTAAGAGACATAATGCAATTTGGAAGTAGCAATACTGCAGTATTTTTCAAAATGCGAGTTGCAGGTGTTCTACACATATTCCAGTTTGAAACCAAGCAGGGGGAAGAAATTTGTGTAGCTCTTCAGACACATATCAATGATGTAATGTTGCGCCGATATTCCAAAGCAAAGTCTGCTGCCGGTGGTTCTGTAAATGGAGATATTGGCAACAATTTTAAGAGTCCTACTATGGAAATATATGAAAGACGTGTTCAAGATCTGTCAAAAACTGTTGAAGATTCTCAAAGAAATGTCGATAAAGCTGCAATGCTAGAGAAAAGGAACATGGAAGCAAGATTGACCAAGTTGAATAATCTGGTGCTAGAGAACACAAAAAAGGAGTCTGTTGTAGCAAATAACCAGGATTTGTATAAGCTTGAAAATGAGCTAAAAGTTCGTAAAGATGAGCTGCTTGCAGCAGAAGAAACTATTACAAGATTGACAAATGAAAAATTGATTTTGACACGGAACCTATCGGAGCTCGAGAAGAGGAGTGCTGATGAGGTGTGTGCTGAAATGCAGAGTAACGTTCTTCAACAAAGATTTGAACAAGAGCGCAAAGCTTTGAAATCTCAAGTGAATGACCTTGAAAAAAAGCTAGAAGGATTTAGACAAGAATTAGCTGCTTCTAAATCCACTCTATCAGCCAAGGATGCCGAGTTGGTTGCATTGCAAAATAATTTAAGGGAACTGGAAGAACTAAGAGAAATGAAAGAGGACATCAATAGGAAGAATGAACAAACAGCTGCCATATTAAGGATGCAAGGGGCCCAATTAGCAGAAATGGAAGCGCTTTATAAAGAAGAGCAAGTTCTGCGGAAACGCTATTTCAACACAATAGAAGATATGAAAGGCAAGATAAGAGTTTACTGCCGTCGAAGGCCTCTAAGTGATAAAGAGATTAATGAGAAAGAGAGAGATGCCCTTACCTGCATAGATGAGTTTACTATTGAACATCCATGGAAGGATGACAAACCGCAGCAATTTGTGTATGATCGTGTATTTGATGATGAAACTACCCAAGAAGATGTATTTGAGGATACAAGGGGCATGGTGGTTGTGGAAAATGTGACTATACTGTCAATTTCAACCATGGAGGAATTGAATAACATAATACAAAGAGGATCTGAACGGCGACATACATCTGGAACTCAGATGAACGAAGAAAGTTCAAGATCTCATCTTATATTTTCAGTTGTAATTGAAAGTACTAACCTCCAAACTCAATCAGTTGCTAGAGGAAAGTTAAGTTTTGTAGATCTTGCTGGTTCAGAAAGAGTAAAAAAATCTGGTTCCACTGGTAGTCAACTTAAAGAAGCTCAAAGTATAAATAAATCATTATCAGCTCTTGGGGATGTTATCAGTGCTTTATCTTCTGGTGGTCAACACATTCCATACAGGAATCACAAGTTAACAATGCTAATGAGTGATTCACTTGGTGGTAATGCTAAAACTCTTATGTTCGTGAATGTATCCCCAGCAGAATCAAACTTGGACGAGACACACAATTCTCTCATGTATGCGGCACGAGTAAGATCGATTGTGAACGATCCGAGCAAGAATGTTTTGTCGAAAGAGGTGGCTCGATTGAAAAAGTTGGTTGCATACTGGAAGGAGCAGGCGGGCAGAAGGGGTGACGAAGAAGAATTGGAAGAAATTGAAGAGGTAAGGCCAATGAAAGAGAGGTCAGATGGGCGGCATTCTATGATAGGCTATATAATGATTGTATATATATTGCTAATTCTTCTTTATCTCATTGCATATATGAATGTACACGCTATTCTACTTCAATATCATCATTTTCTTTTGCCCAACCTTGTAAATTCATCTTCTACAGAGAAGTGA 3414 0.3916 MTIDMPSPLTQSMRTSRPSFSSSNGYDDAPLHIHAGVSNGDDYDSDSSNFAPPTPSTITMSIPAELAGAVPLMDRFQVEGFLRLMQKQINSAGKRGFFSKRSVGPQVQEKFTFEDMLCFQKDPIPTSLLKINGDMVSRATKLFQIILKYMGVDSPERVNPISLDERVELVGKVYKHSLKRSELRDELFVQLSKQTRNNPERQYLIKAWELMYLCASSMPPSKDIGGYLSEYVHNVAHNVTTDAEIQALAINTLNALKRSVKAGPRHIMPGREEIEALLTGRKLTTIVFFLDETFEEITYDMATTVADAVEEYVGLDDNKYIGDLLAEFKAAKDRSKGEILQCKLIFKKRLFRESDDAVADPMFVQLCYVQLQHDYILGNYPVGRDDAAQLSSLQILAEIGFVRAPETCTDWDSLLERFLPRQIAITRAKREWELDILSRYHSLEHLTKDEARQQFLRILRALPYGNSVFFHVRKIDDPIGLLPGKIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKAKSAAGGSVNGDIGNNFKSPTMEIYERRVQDLSKTVEDSQRNVDKAAMLEKRNMEARLTKLNNLVLENTKKESVVANNQDLYKLENELKVRKDELLAAEETITRLTNEKLILTRNLSELEKRSADEVCAEMQSNVLQQRFEQERKALKSQVNDLEKKLEGFRQELAASKSTLSAKDAELVALQNNLRELEELREMKEDINRKNEQTAAILRMQGAQLAEMEALYKEEQVLRKRYFNTIEDMKGKIRVYCRRRPLSDKEINEKERDALTCIDEFTIEHPWKDDKPQQFVYDRVFDDETTQEDVFEDTRGMVVVENVTILSISTMEELNNIIQRGSERRHTSGTQMNEESSRSHLIFSVVIESTNLQTQSVARGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETHNSLMYAARVRSIVNDPSKNVLSKEVARLKKLVAYWKEQAGRRGDEEELEEIEEVRPMKERSDGRHSMIGYIMIVYILLILLYLIAYMNVHAILLQYHHFLLPNLVNSSSTEK 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0287 1137 Pfam Kinesin motor domain 869 1037 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele55g0287 1137 Gene3D Kinesin motor domain 872 1044 IPR036961 -
Lele55g0287 1137 ProSiteProfiles FERM domain profile. 272 563 IPR000299 GO:0005856
Lele55g0287 1137 Pfam FERM central domain 355 469 IPR019748 -
Lele55g0287 1137 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Lele55g0287 1137 SUPERFAMILY Second domain of FERM 347 464 IPR035963 -
Lele55g0287 1137 Gene3D - 1045 1088 - -
Lele55g0287 1137 Coils Coil 646 687 - -
Lele55g0287 1137 PRINTS Kinesin heavy chain signature 907 924 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele55g0287 1137 PRINTS Kinesin heavy chain signature 987 1008 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele55g0287 1137 PRINTS Kinesin heavy chain signature 938 956 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele55g0287 1137 CDD FERM_B-lobe 364 462 IPR019748 -
Lele55g0287 1137 Gene3D - 467 574 IPR011993 -
Lele55g0287 1137 Gene3D Kinesin motor domain 752 871 IPR036961 -
Lele55g0287 1137 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Lele55g0287 1137 SMART kinesin_4 807 1045 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele55g0287 1137 Coils Coil 587 607 - -
Lele55g0287 1137 Gene3D - 361 462 IPR014352 -
Lele55g0287 1137 CDD FERM_C_KCBP 466 572 - -
Lele55g0287 1137 Gene3D MyTH4 domain 98 280 IPR038185 -
Lele55g0287 1137 ProSitePatterns Kinesin motor domain signature. 937 948 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lele55g0287 1137 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 467 576 - -
Lele55g0287 1137 ProSiteProfiles Kinesin motor domain profile. 869 1037 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele55g0287 1137 SUPERFAMILY Prismane protein-like 752 825 IPR011254 GO:0003824|GO:0016491
Lele55g0287 1137 ProSiteProfiles Kinesin motor domain profile. 809 868 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele55g0287 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 809 1065 IPR027417 -
Lele55g0287 1137 MobiDBLite consensus disorder prediction 1 56 - -
Lele55g0287 1137 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Lele55g0287 1137 PANTHER MYOSIN VII, XV 4 815 - -
Lele55g0287 1137 MobiDBLite consensus disorder prediction 41 56 - -
Lele55g0287 1137 FunFam Kinesin-like calmodulin binding protein 352 463 - -
Lele55g0287 1137 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 280 - -
Lele55g0287 1137 SUPERFAMILY PH domain-like 469 557 - -
Lele55g0287 1137 Coils Coil 702 774 - -
Lele55g0287 1137 MobiDBLite consensus disorder prediction 1 26 - -
Lele55g0287 1137 SMART B41_5 279 469 IPR019749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0287 Lele-ChrLele55 1754759 1761961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0287 39 875 Calmodulin-binding Proteins AT5G65930 65.171 0.0 1216