Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0286 ATGAATCCACGGCCATGCTTCTCCCTCTCCCCCTCCTCCGCCGTCGCCGTCATATGCATTCTGCAACTTCTCTTCCCGGCGGGGATGTCCCAACCCCAGAAAATGAGAACAACCCCATACGTCTTCGGCCCCTTCGACGTCTCTAACTACACAACCTTGAAAGTCATTCAACCGGCGTCGATCAACTTCGGAGCCCTCCAAATAACTCCGGACACAGCCGGCAACGTCCCCCTCGCAAACACCTCCGGCAGAATCCTCTTCCGGGAACCCTTCACACTCTGGGAAAACACCGGAAAAGTTGCTTCCTTCAACACTTCATTCCTCATCAACGTCTATCGGGTCAACAACGCCACTCCCGGCGAAGGTGTCGCCTTCGTCATTGCCCCATCCCTCGACCTTCCCCGAAACAGCCATGGCCAATACCTCGGCCTCACCAACTCCACCACCGACGGCAGCCCCGACAACCACATCATCGCAGTCGAACTAGACACCGTTAAGCAAGACTTCGACCCCGACGACAACCACATCGGACTTAACATCAACAGCGTCAAATCAAAAACCAACGTCTCACTGTCTCAATTCGGAATCCAGATCGCTCCAGACAGTGCCAAATACTATGTAATCTGGATAGACTACAACGGTTCAAGCAAGAAAATTAACATATTCATCAAAGAACAACCAGACAGAAACGCACCTACAGTATCAAAACCAGAAGAACCAGTGTTAACTTCAGATCTAGATCTCAAAACCATCGTGAAACAGAGCTCTTACTTCGGGTTCTCTGGTGCCACCGGAATAACCTACCAGTTAAACTGTGTTCTGAGATGGAACATGACGGTGGAGGTTCTCTCAGAAAACAAGAACAAGTCGCGATCTTTGAAGGTGGGCTTTGGCATTGGGGTGCCATTGATGGCTTTGATTCTCGTGGGGATTGGTGGGTCAGTGTATTATGCTTATAAGAAGAAGAGAAGAAGAAGGTTGGACGATGAACAGATTCTGGGGACGTTGAAGAGCTTGCCGGGAACGCCGAGAGAGTACTCGTTCAAGGAATTGAAGAAGGCGACGAACAATTTCAGTGAGAAGAACAAGCTCGGAGAAGGAGGTTATGGGATGGTATACAGAGGGATTTTGCAGAAAGAGAATAATTTGGAGGTTGCAGTGAAGAAATTCTGCAGAGATAAGATGAAATGCAAAGATGATTTCTTAGCTGAACTCACCATTATCAATCGTCTTCGTCATAAGCATCTTGTGAGGTTACTAGGTTGGTGCCACAAGCATGGGGTGTTAGTGTTGGTGTATGAGTTCATGCCTAATGGAAGCTTAGACGATCACCTTTTCTTTGAGGAAGGAAAACCCACAACAACGCCTCTAAGTTGGGACCTACGTTACAAAATCATCACCGGCGTTGCTTCAGCGCTTAACTACCTTCACAACGAGTACGACCAAAAAGTAGTTCACAGAGATCTCAAAGCCAGCAACATCATGTTGGACTCTGACTTCAACGCTCGCCTAGGCGACTTTGGCCTAGCTCGAGCCATTGAGCACGAGAAAACCTCGTACGCCGAGGTCGAAGGAATCCACGGCACGATGGGCTACATTGCACCTGAGTGCTTCCACACGGGGAAGGCAACCCGACAATCAGACGTGTTCAGTTTTGGAGCGGTTCTTCTGGAAGTGGTGTGTGGCGAGAGGCCATGGACGAATAAAGAAGGGTTTCAGTTGCTGGTGGATTGGGTTTGGTATTTGTATGGTGAAGGAAGGATTCTCGAGGCAGTGGACAAAAGGCTTGGGAATGAGTATGAGGTTGAAGAAGCAGAGAAAATATTGAAATTAGGGTTAGCCTGTTCTCATCCAATAGCTGGTGAGAGGCCAAAGATGCAAAGCATAGTGCAGATTATAAGTGGGGCAGTGCCAGTGCCTTATGTGCCTACAAGTAAGCCTGCATTTATTTGGCCAGCTGTGGATTTTGGAAGCTTTATTAGTGATCTCACAACACCATCTTCAACCACTGTGAACACACCTCTTCATACAGATTCAGATCCTCTGCATTCAAATTCATCAAAGTGA 2067 0.4823 MNPRPCFSLSPSSAVAVICILQLLFPAGMSQPQKMRTTPYVFGPFDVSNYTTLKVIQPASINFGALQITPDTAGNVPLANTSGRILFREPFTLWENTGKVASFNTSFLINVYRVNNATPGEGVAFVIAPSLDLPRNSHGQYLGLTNSTTDGSPDNHIIAVELDTVKQDFDPDDNHIGLNINSVKSKTNVSLSQFGIQIAPDSAKYYVIWIDYNGSSKKINIFIKEQPDRNAPTVSKPEEPVLTSDLDLKTIVKQSSYFGFSGATGITYQLNCVLRWNMTVEVLSENKNKSRSLKVGFGIGVPLMALILVGIGGSVYYAYKKKRRRRLDDEQILGTLKSLPGTPREYSFKELKKATNNFSEKNKLGEGGYGMVYRGILQKENNLEVAVKKFCRDKMKCKDDFLAELTIINRLRHKHLVRLLGWCHKHGVLVLVYEFMPNGSLDDHLFFEEGKPTTTPLSWDLRYKIITGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARAIEHEKTSYAEVEGIHGTMGYIAPECFHTGKATRQSDVFSFGAVLLEVVCGERPWTNKEGFQLLVDWVWYLYGEGRILEAVDKRLGNEYEVEEAEKILKLGLACSHPIAGERPKMQSIVQIISGAVPVPYVPTSKPAFIWPAVDFGSFISDLTTPSSTTVNTPLHTDSDPLHSNSSK 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0286 688 CDD STKc_IRAK 364 633 - -
Lele55g0286 688 FunFam probable L-type lectin-domain containing receptor kinase S.5 436 638 - -
Lele55g0286 688 Pfam Legume lectin domain 42 290 IPR001220 GO:0030246
Lele55g0286 688 ProSitePatterns Protein kinases ATP-binding region signature. 364 389 IPR017441 GO:0005524
Lele55g0286 688 Pfam Protein kinase domain 358 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0286 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Lele55g0286 688 Gene3D Phosphorylase Kinase; domain 1 343 435 - -
Lele55g0286 688 ProSiteProfiles Protein kinase domain profile. 358 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0286 688 SMART serkin_6 358 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0286 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 282 IPR013320 -
Lele55g0286 688 ProSitePatterns Legume lectins beta-chain signature. 158 164 IPR019825 -
Lele55g0286 688 MobiDBLite consensus disorder prediction 669 688 - -
Lele55g0286 688 FunFam probable L-type lectin-domain containing receptor kinase S.5 343 435 - -
Lele55g0286 688 Gene3D Transferase(Phosphotransferase) domain 1 436 638 - -
Lele55g0286 688 SUPERFAMILY Protein kinase-like (PK-like) 339 632 IPR011009 -
Lele55g0286 688 CDD lectin_legume_LecRK_Arcelin_ConA 59 280 IPR001220 GO:0030246
Lele55g0286 688 Gene3D - 38 299 - -
Lele55g0286 688 PANTHER - 70 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0286 Lele-ChrLele55 1750430 1753973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0286 64 640 Receptor kinase-like Gene Family AT3G53810 40.000 3.16e-127 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele55g0286 Pkinase 3.7e-49 CL0016