Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0282 ATGGATTATTCCTGCGAGACGGAGATCCTAATTTTACAGGGTGAGAAGAAGCTTCGAATCTTCCATGGTGCCGGTCGTTGTTCCCTACGCCAGATGAATTATTGCCTCCTTAGAATCGCACGCTTTATGCTTTGGCTAATTCCGCTGTTATGGAGCTTAACCTTCCATGCTTTGATATTAGAGAGCTCCCAAGTCTTGCCTGTGGATCATACTGAGCAAGGCTTTAATGGCTTATCCCCACCCTTAAGCCGTCCAAGTCGATCTATTCTGTCCTTTTCACCTAAGCCCAGTACGACCCTTGTTGCTACCCTAGATGGGACAATATACTTGGTGGAGATTGGTTCTATGAGGGTAATATGGTCATTTCCTACCGGATCACCAATCTACCATTCATATCAAGCTCCTCTCAACAACGATAATGTTAAAGAAAATGTGTGTGGATTAGCTAGCAGTTTCATGGAATGTGGAGATGATTGGGCGCTATATATCCAAAGCAAGCACTTTGGTAAAATGAGACTCTCAACATCTGTGGCAGATTTTGTTGCCGCTACACCTACCTTTTCAGATGATGGAGGTGTTATTCTTGGATCCAAAAGAAGTACTTTGTTTGAAATTGACGCTATAAGTGGAAAGCTCATTCGAAACTATGCTGCTGATAATCTTTCGGCTCTGTGGAGTAATGACAGGCATAGTGGAACAAATATTGTCAGTACAAAGAATAAAGGGTTCACTGGTCCTGCAATGCTAAGCACACCGGAGCTTCTGCTTAAAATAATTAGAACAGATTATTCTCTACAAGGTGTAGGTCCTAGATCTGGAAAAGTTTTGTGGACTATGAATGTAGCTGAATTTAAGGCTTCATTATTCTGTGGAAATAATGAAAATCTGTTTACTGGGGCTTCATTAGATTCAGAGGATAAATATGCGTCCAACAATGGCTTGGATTTTGCTATGCCATATGATTGTCATGAGTTAAAAGAAGTACATCGCTTGCAAAAGAATCTTCTTTTTGGTGATCTCACTGAAAGTTTACCTGGGGCCTATTATGATAAGGAAATGCTTCCAGAGCCTAATTCAGATCTGTTGCTTCTTCCACAATCTAATTTAAATACTTCATTAAATCAACATGATGATAATATGAAGCTTCCTACTTTACCAAATGTGTTGCCTTCTTTGCCTCAAAACTTTAATTCCCATGACAATGATGGTAATGCAGCCACTCTCTCTCAACCTCCCGCAGAGATTAGTGCACGAGGGGAAGTTGATAGAAAGAAGGTGATGGAATGGCCAAGATCATATTTATTATTGTTTATGATCTTACCTCTGGGTCTTTTGACGTACCATCTTCTAGTGGTCAAAAAGCCAGTTATGTCAGTGGTCCAGAATGGTGGAACTGAAATAAAAGTTTCTCCTCTTGAGAAAAAAAGAGCCCGTAAGTCTGGAAAAACCAATGGCATTGATGACAAAAGAAATAAGCATCTATCATCAGAAGATGAGGATGTAACGGCTAGTAGCAAAATTGCTAGGGAAGCATTGCCAAATGTTGAAAAAGTTGAGGGAGCCAATGGACGTCAAATCGGTAAACTCTTTGTATCAAATAAAGAAATCGCCAAGGGAAGTAACGGTACGATAGTCCTTGAGGGAACGTATGAAGGGCGGGCAGTTGCTATCAAGCGTTTAGTCCAGTCCCATTATGATATTGCTGTTAAAGAAATTCAAAATCTTATTGCATCTGACCATCATCCTAACATTGTCCGATGGCATGGGGTTGAATTTGATCAAGATTTTATATATCTTGCTCTGGAACGTTGTATATGCAATTTAGATGATTTGATTCAGATTTATTCAGATTGCTATTCAAAACCAGTGTCTAGTAAAAACCAGTCTTCTGAATGTTTGAAGGTCCAAATAAAGATGGGAAAGGATACCATGCAAGAGCTTTGGAAAGCAAATGGCTATCCATCCTCTTTATTATTGAAGTTGATCAGGGATATAGTTTCTGGACTTGCTCATTTACATGAATTGGGAATCATACATCGTGATTTGAAACCTCAGAATATTTTGATAACTAAGGAAAGACATGTAGGTGCAAAAGTTTCTGACATGGGCATCAGCAAACGCCTTCTTGGAGATATATCATCCTTTAGTCATAATGGTACTTGTTGTGGCAGTTCTGGTTGGCAAGCACCCGAACAGCTTCTTCAAAGACGTCAAACGAGAGCAGTAGATTTATTTAGTCTAGGATGTATTCTCTTCTTTAGCATAACTAAGGGAAGACATCCATTTGGAGAGCGTCTTGAACGTGATTTCAATATTGTGAAAAATAAAAAGAACCTTTCTCCAGTGGAATTCATTCCTGAGGCTGAAGATCTTATTGTTGGTTTATTAAACCCTACTCCTAAGTTAAGGCCAAAGGCTATTGAAGTGCTGCATCATCCTTTCTTCTGGAGTTCTGAGATGAGACTCTCATTTCTTCGTGATGTTAGTGATAGGGTGGAACTAGAAGATAGGAAGATTAATGCTAATCTTTTAATGGCATTAGAAAGTATTGCGCCAAAGGCTTTAGATGGGGCAAATTGGGATGAAAAGATGGAACCTGTCTTCATTGCTAACATTGGCCAATTCAGGCGATATAAGTTTGACAGGGTTCGTGACTTGTTGCGAGTTATGAGAAACAAGCTGAATCATTATAGAGAATTGCCTCAAGAAATTCAGCAACTTCTAGGACCTGTTCCAGAAGGATTCAATGAATACTTTGCTAGTCGATTTCCTAGACTCTTAATTAAAGTGTATAAAATTGTACATAAATATTGCGAGCAGGAGGAATGTTTCCAAAGGTATTTTAGAAATGTTAATTTGTACAAGTGTTGTCTGTAA 2877 0.3914 MDYSCETEILILQGEKKLRIFHGAGRCSLRQMNYCLLRIARFMLWLIPLLWSLTFHALILESSQVLPVDHTEQGFNGLSPPLSRPSRSILSFSPKPSTTLVATLDGTIYLVEIGSMRVIWSFPTGSPIYHSYQAPLNNDNVKENVCGLASSFMECGDDWALYIQSKHFGKMRLSTSVADFVAATPTFSDDGGVILGSKRSTLFEIDAISGKLIRNYAADNLSALWSNDRHSGTNIVSTKNKGFTGPAMLSTPELLLKIIRTDYSLQGVGPRSGKVLWTMNVAEFKASLFCGNNENLFTGASLDSEDKYASNNGLDFAMPYDCHELKEVHRLQKNLLFGDLTESLPGAYYDKEMLPEPNSDLLLLPQSNLNTSLNQHDDNMKLPTLPNVLPSLPQNFNSHDNDGNAATLSQPPAEISARGEVDRKKVMEWPRSYLLLFMILPLGLLTYHLLVVKKPVMSVVQNGGTEIKVSPLEKKRARKSGKTNGIDDKRNKHLSSEDEDVTASSKIAREALPNVEKVEGANGRQIGKLFVSNKEIAKGSNGTIVLEGTYEGRAVAIKRLVQSHYDIAVKEIQNLIASDHHPNIVRWHGVEFDQDFIYLALERCICNLDDLIQIYSDCYSKPVSSKNQSSECLKVQIKMGKDTMQELWKANGYPSSLLLKLIRDIVSGLAHLHELGIIHRDLKPQNILITKERHVGAKVSDMGISKRLLGDISSFSHNGTCCGSSGWQAPEQLLQRRQTRAVDLFSLGCILFFSITKGRHPFGERLERDFNIVKNKKNLSPVEFIPEAEDLIVGLLNPTPKLRPKAIEVLHHPFFWSSEMRLSFLRDVSDRVELEDRKINANLLMALESIAPKALDGANWDEKMEPVFIANIGQFRRYKFDRVRDLLRVMRNKLNHYRELPQEIQQLLGPVPEGFNEYFASRFPRLLIKVYKIVHKYCEQEECFQRYFRNVNLYKCCL 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0282 958 MobiDBLite consensus disorder prediction 471 503 - -
Lele55g0282 958 Pfam Protein kinase domain 532 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0282 958 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 522 602 - -
Lele55g0282 958 SUPERFAMILY Protein kinase-like (PK-like) 530 820 IPR011009 -
Lele55g0282 958 CDD RNase_Ire1 819 948 - -
Lele55g0282 958 SMART PGNneu 881 935 - -
Lele55g0282 958 PANTHER IRE1-RELATED 171 950 IPR045133 GO:0004521|GO:0004674|GO:0030968
Lele55g0282 958 SMART serkin_6 530 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0282 958 Gene3D - 79 313 IPR015943 GO:0005515
Lele55g0282 958 Pfam Ribonuclease 2-5A 821 948 IPR010513 GO:0004540|GO:0006397
Lele55g0282 958 Gene3D Transferase(Phosphotransferase) domain 1 638 817 - -
Lele55g0282 958 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 640 817 - -
Lele55g0282 958 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 85 283 IPR011047 -
Lele55g0282 958 ProSiteProfiles Protein kinase domain profile. 530 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0282 958 Gene3D KEN domain 818 956 IPR038357 -
Lele55g0282 958 MobiDBLite consensus disorder prediction 398 419 - -
Lele55g0282 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Lele55g0282 958 Gene3D Phosphorylase Kinase; domain 1 515 602 - -
Lele55g0282 958 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 819 952 - -
Lele55g0282 958 ProSiteProfiles KEN domain profile. 818 950 IPR010513 GO:0004540|GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0282 Lele-ChrLele55 1709033 1713868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0282 556 814 MAP Kinase Kinase Kinase AT3G06030 25.095 1.15e-19 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Lele55g0282 Pkinase 2.3e-37 CL0016