Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0262 ATGGCATCGACTGCACCAAACCCCCTTTTGAGGGTGGAGGAGATACAAGGGAGAGGAAGGGGGATAGTTGCATCTCAACCTCTTAAAGCTGGCCAAGTTGTTGTTAGAGATTCTCCTATCGTGCTGTATTCTGCTTTGCCTTTGATCCCACAGTCATCATCCAGCTTCTCTTCTCCAGGCTTCTGTGACCACTGTTTCAGAACCTTACCAGGGCCATCTTCAATGGGCGGTCCTTCATCTTCTCTGTGCCCTTCTTGTGGCCACCATCGTTTCTGTAGCGCAAAATGTCTATCCGTTGCCCAAAATACATCCCACACTTCTTGGGTATGTCAAGCATTATCTCATCTCCGAGTCAATTCTGTACTGCTTGAACAACCCCTTGAATGTCAAGTCCAAGCGCATTTTGTCATTGCCGCCTACAATCTTGCCAATGTCTCCCCATCGGATTTTCAAACTTTGCTTGCTCTTCATGGTTCTCCTGATGATACTACAATTGCTACAGCTCAGTTCCTGCACTCCCTTATTACCTCCCTCTCTCCATTTGCTCCAACTAGCAATCAGAATGGATTTTCCTTGGAACTCACTGCTGCCCTGTTGGCCAAGGATAAATTCAATGCATTTGGCTTGATGCAACCCTTCTCTGAAGATAATGACCAGAGATCTGTCAGAGCTTATGGTATATACCCTTATGCCTCCTTCTTTAACCATGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTTGATACTAGTGCAACGGATGACAACCACACTGACATTATCATTAGGATGATCCATGATGTTCCTCAAGGTAGGGAGGTCTGTTTGAGCTATTTCCCTGTGAATGAAAATTATTCTAGTAGGCAGAAAAGACTGGCGGAAGACTATGGCTTCACCTGTAAGTGTGATCGATGTAATGTCGAAGCAAATTGGTCAGATAACGATAGTGTTGAGGATGATGCTGAGGATGTTGAAGAGGCGATGGAAGAGGATGAATGTGAAAATATGGCAACTTCTGACACTGAAAGTAATCCGCAAAGAGATAACAGTGATTTTCCCCATGCATATTTCTTTTTGAAATTCATGTGTGATAGAAAGAATTGCTGGGGTACTTTAGCTCCTTTACGCACAGAGGGTAATACTCAGTCCAATGTTATGGAATGTAATGTCTGTGGCAACTTGAAGAGCGACAATGTCCTTGATGGTGATGGAGGACAAGATGGAGTTTCCATGGATGACTGA 1242 0.4428 MASTAPNPLLRVEEIQGRGRGIVASQPLKAGQVVVRDSPIVLYSALPLIPQSSSSFSSPGFCDHCFRTLPGPSSMGGPSSSLCPSCGHHRFCSAKCLSVAQNTSHTSWVCQALSHLRVNSVLLEQPLECQVQAHFVIAAYNLANVSPSDFQTLLALHGSPDDTTIATAQFLHSLITSLSPFAPTSNQNGFSLELTAALLAKDKFNAFGLMQPFSEDNDQRSVRAYGIYPYASFFNHDCLPNACRFDYVDTSATDDNHTDIIIRMIHDVPQGREVCLSYFPVNENYSSRQKRLAEDYGFTCKCDRCNVEANWSDNDSVEDDAEDVEEAMEEDECENMATSDTESNPQRDNSDFPHAYFFLKFMCDRKNCWGTLAPLRTEGNTQSNVMECNVCGNLKSDNVLDGDGGQDGVSMDD 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0262 413 ProSiteProfiles SET domain profile. 8 279 IPR001214 GO:0005515
Lele55g0262 413 Coils Coil 314 334 - -
Lele55g0262 413 Gene3D - 124 206 - -
Lele55g0262 413 Gene3D SET domain 21 305 IPR046341 -
Lele55g0262 413 MobiDBLite consensus disorder prediction 313 348 - -
Lele55g0262 413 MobiDBLite consensus disorder prediction 313 337 - -
Lele55g0262 413 Gene3D - 61 119 - -
Lele55g0262 413 CDD SET_SMYD 204 305 - -
Lele55g0262 413 SMART set_7 8 285 IPR001214 GO:0005515
Lele55g0262 413 SUPERFAMILY SET domain 8 306 IPR046341 -
Lele55g0262 413 Pfam SET domain 19 278 IPR001214 GO:0005515
Lele55g0262 413 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 401 IPR044238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0262 Lele-ChrLele55 1598489 1599730 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele55g0262 SET 2.4e-11 No_clan