Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0259 ATGCCTGTTCGGTTTCATGGGTTCCCTGGCGTTGAATCTGGTGATCGAGCAAAGCAAGAGGAAGAAGGGGCCTTCTCGAATAAGTGCCCCAACTGTTATATTTTACGGCTTGATTCTCGTCTTGTTTGTGTTTTTCCTGTTCAGTGCGTACAAGCATTGGTCCCACAGGCTGAAAATTCTTTTGGAGACTCAAAAAAGTCTGAGCTGCCTGGATATGCTGTTTTAAATACCTCTAAAGGCTCCATAGTAATTGAACTTTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTTATTGACTTATGTCAAAAAGGGCATTTCAAGGGAATGCTTTTCCGCCATGTAATTAAGCATTATGTGATTCAGGCAGGGGAGAACCAAGGGACTGGGGCTACAGAAGATTGGAGCCTGAGAGGAAAACATTATTCAAGTTCTGGACGTAATAAATCATGGCTAAATGTCTTGCTGAATGTCATTGTTATCCCACTAGCTGCCATTTTGAATCTACCAGTTGCATCCATTGCACTTTTGACCTATTACAGGATAAGATGTTATGTTCCCGACAAGGATGATCGGTTTGCCACTATGAGTTCGAGGAAAAAACAGAAGAAACTGTAA 618 0.4175 MPVRFHGFPGVESGDRAKQEEEGAFSNKCPNCYILRLDSRLVCVFPVQCVQALVPQAENSFGDSKKSELPGYAVLNTSKGSIVIELYKESAPEVVDEFIDLCQKGHFKGMLFRHVIKHYVIQAGENQGTGATEDWSLRGKHYSSSGRNKSWLNVLLNVIVIPLAAILNLPVASIALLTYYRIRCYVPDKDDRFATMSSRKKQKKL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0259 205 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 69 145 IPR002130 GO:0000413|GO:0003755
Lele55g0259 205 Gene3D - 56 154 IPR029000 -
Lele55g0259 205 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 58 143 - -
Lele55g0259 205 SUPERFAMILY Cyclophilin-like 70 134 IPR029000 -
Lele55g0259 205 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 74 132 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0259 Lele-ChrLele55 1577371 1584153 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0259 51 130 U-box Gene Family AT5G67530 34.940 7.93e-11 58.9