Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0257 ATGGCTAGGATCAAGCCTCAAGCTCTGCTACAGCAAAGCAAGAGAAAGAAGGGGCCCTCCCGAATAAGTGCATCAACTATTATATTTTACAGCTTAATTCTGGTCTTGATTGTGTTTTTGCTGTTTATGGCGTATGGACATTGGTTTCCCAGGTCGAGATTTCGGTCAGAGAATCAAATGGTAGTCTCTAAGGCTGAAAATACTCTTGGGGACTCAAAAAAATCTGATCTACCTGGATATGCTGTTTTAAATACCTCTAAAGGCTCTATAATAATAGAACTTTACAAGGAAACTTCCCCTGAAGTTGTTGATGAATTCATTGACTTATGCCAAAAGGGGCACTTCAAGGGAATCCATTTCCATCATGTAATCAAGCACTTTGTGATTCAAGCAGGGGAAAACCAAGGGAAAGGCCATACCATAGATTGGAGTGTGAGAGGAAAGCACACTACCAGTGTGAAGCATGAAGCATTCATGCTTGGAACTTCCATGGGAAAACACACAAACAAAGGATTTGATCTTTTCATTACAACTGCACCTATACCAGACCTGAATGAGAAGCTTATTGTGTTTGGGCGGGTCATCAAGGGAGAGGATGTTGTTCAGGAGATTGAAGAAGTGGATACAGATGAACATTACCAACCAAAATTCCCTATTAAAATACTTGATGTGACACTTCAACAGAAGATCTGA 693 0.4055 MARIKPQALLQQSKRKKGPSRISASTIIFYSLILVLIVFLLFMAYGHWFPRSRFRSENQMVVSKAENTLGDSKKSDLPGYAVLNTSKGSIIIELYKETSPEVVDEFIDLCQKGHFKGIHFHHVIKHFVIQAGENQGKGHTIDWSVRGKHTTSVKHEAFMLGTSMGKHTNKGFDLFITTAPIPDLNEKLIVFGRVIKGEDVVQEIEEVDTDEHYQPKFPIKILDVTLQQKI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0257 230 SUPERFAMILY Cyclophilin-like 77 226 IPR029000 -
Lele55g0257 230 Gene3D - 65 230 IPR029000 -
Lele55g0257 230 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 226 IPR002130 GO:0000413|GO:0003755
Lele55g0257 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 230 - -
Lele55g0257 230 FunFam Peptidyl-prolyl cis-trans isomerase 67 230 - -
Lele55g0257 230 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 225 IPR002130 GO:0000413|GO:0003755
Lele55g0257 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Lele55g0257 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Lele55g0257 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Lele55g0257 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Lele55g0257 230 CDD cyclophilin 82 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0257 Lele-ChrLele55 1555182 1558632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0257 79 226 U-box Gene Family AT5G67530 31.818 9.91e-18 79.7