Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0256 ATGATTAACGTTTGGCTTGTGATGTTAATGGCCCTCTCTAATGGGCTTTCTTCATCTGGGGCTGGCATGAATGATTCAGGAATACCTGAATTTGTAAATATTGGAACACTCTTCTCTTTCAATACCAGTGTTGGTAGAATTGTAAAAGTAGCTATTGAAACAGCGGTTGCGGACATAAATTCCGATCCTTCCATTCTTGGAAGAACTAAGCTGAGGGTCTCAATGCAAGAGGACTCCAAATACAGAGTCTTTCAGCTCATGGCAAGACACACTGTGGCTATAATTGGTCCCCAGACATCTATAACAGCTCATGTCATATCTCATATTGCAAACGAGCTCCAAGTTCCACTTCTATCATTTTCAGCCACAGACCCTACACTCTCTTCACTTCAATTCCCATTCTTTGTTAGAACTGCTCCTAGTGATGTTTATCAGATGACTGCAATTGCCGAGCTTATAGACTTCTATGGGTGGAGAGAAGTTATCGCAATTTATGCCGACGATGACCATGGGAGGAACGGGATTGGTTCTTTAGGGGATAAGCTTGCAGAGAAACGTTGTAAAATCTCATATAAAGCACCAATAAGCCCTGAAGCAACTAGAGAGGAGATTACTGATGCGCTTGTTCAGGTGGCTCTTGCTGAATCTCGGATTATAATTCTTCACACTTATGCTGCTTGGGGCCCCCAGGTGTTTGATGTGGCGAAATATCTTGGGATGATGGGAACTGGGTATGTCTGGATAGCCTCCAACTTTCTCACTACACTTCTGGACTCTGAGAGTCGCATCCCTTCAGATCAAATAGATGAATTTCAAGGAGTTCTTACACTGCGTGTGCACACACCCGATTCAGAGCTCAAGAGAAGGTTCTTTTCTAGGTGGAAAAACCTGACTAGCGGAATGACTGCTGATGGTCCACTTGGATTGAACACTTTTGGTCTCTATGCGTATGATACTGTTTATATGCTTGCTTGTGCACTTGATACATTTTTTAAACAAGGGAACCGAATCACATTCTCATATGATTCAAAGTTATCTCAACTACGTGGAGACAGCTTGCATCCGGATGCAGTGAACATCTTTGATCAAGGAAATCTGTTGCGTACAACTATTTATGGGGTTAACATGACTGGGGTAACAGGTCATATTAGGTATGCAGCTGATGGGAATCCAATGAATCCATCATATGAAATCATCAATGTGATAGGAACAGGTGCAAGGAGGATTGGTTATTGGTCTAATCACTCTGGATTATCTGTTGATCCTCCAGAAGTACTTTATTCAAAACCATTCAATCGTTCCAGTGCGAATCGAAAGCTACTCCCTGTGATCTGGCCTGGAGAAACAACCCAGAAGCCCCGTGGTTGGGTTTTTTCAAACAATGGAAGGAACTTAAGAGTTGGAGTACCAAGAAGGGTTAGTTACCGACCATTTGTCTCACAAATGCAAGGCACTGACATGTTTAAGGGATTCTGCATTGATATATTCCTTGCTGCAGTGAACTTACTGCCCTATGCGGTTCCCTATAAGTTTATTCCATTTGGGGATGGTCGCAGCAATCCTAGTAACACTGAGCTTGTTCGTCTGATCACGGCTGGCGTCTTTGATGCTGCAGTGGGTGACATTACGATTACAAAAGAGAGAACAATGATGGTGGATTTTACTCAGCCATATATCGAGTCCGGTCTAGTAGTCGTAGCACCTGTTAAGAAGGTAGAATCCAATGCGTGGGCTTTTCTGAGGCCATTTACGCCGATGATGTGGGGTGTTACAGCAATCTTGTTCTTAGCCGTAGGATTTGTTGTTTGGATCTTGGAGCATAGGCTGAATGATGATTTCCGAGGACCTCCCAAAAAGCAAGTTGTGACAATTTTGTGGTTTAGCTTTTCAACTATGTTCTTTTCTCACAGGGAAAATACGGTGAGCACGCTTGGTCGCTTTGTGGTACTTATATGGCTATTTGTGGTTCTTATAATCAATTCAAGTTACACAGCAAGTCTGACTTCAATCCTCACAGTACAACAGCTTTCTTCGCCCGTTAAAGGCATCGAAAGTTTAGTAAAAAGCAAAGAACCTATTGGGTACTTGCAGGGTTCTTTCACTGGAGATTACTTAGTGGAGGAAGTTGGCATTCATGAATCAAGACTCGTTCCTTTGAAAACAGGAGATGAGACTGCTAAAGCATTAAAAGCCGGCCCCAACAAAGGCGGTATTGCTGCATATGTCGATGAGCGTGCTTACATTGAGCTCTTCCTTTCAAGCCGGTGTGATTTTACTATTGTAGGTCAAGAGTTCACCAGAAATGGCTGGGGATTTGCCTTTCCTAGAGACTCTCCTTTAGCAGTTGACCTTTCAACGGCGATTCTGGAACTGGCAGAGAATGGAGATCTTCAAAGGATCCATGACAAATGGCTTTTGAACAGCGCTTGCCTAGCACAAGGTGCAAAGCTTGAAGTGGACAGACTTGATTTTAAATCCTTCTGGGGTCTCTATTTGGTGTGTGGCCTAGCTTGCTTGCTGGCTCTCCTCATCCATCTCATACAAATGATGAGACAGTACACCAAACACTATTCCAATGAAACCGAGTCCTCCGGCCAGAGCTCGATGTCCACGCGCCTCCGGACTTTCCTGACATTCGTGGACGAGAAAGAGGAGGAAGTTAAGCATCGGTCCAAGAGAAGCAGCAGCACTGTGGGGGGATCATTGTCATCTTCAACCATATACTCCTCCAACAAAGATTATACTCAATCCTCTTCAAACAAAAGCATTGATTGTGCTTATGACGCCTGA 2790 0.4373 MINVWLVMLMALSNGLSSSGAGMNDSGIPEFVNIGTLFSFNTSVGRIVKVAIETAVADINSDPSILGRTKLRVSMQEDSKYRVFQLMARHTVAIIGPQTSITAHVISHIANELQVPLLSFSATDPTLSSLQFPFFVRTAPSDVYQMTAIAELIDFYGWREVIAIYADDDHGRNGIGSLGDKLAEKRCKISYKAPISPEATREEITDALVQVALAESRIIILHTYAAWGPQVFDVAKYLGMMGTGYVWIASNFLTTLLDSESRIPSDQIDEFQGVLTLRVHTPDSELKRRFFSRWKNLTSGMTADGPLGLNTFGLYAYDTVYMLACALDTFFKQGNRITFSYDSKLSQLRGDSLHPDAVNIFDQGNLLRTTIYGVNMTGVTGHIRYAADGNPMNPSYEIINVIGTGARRIGYWSNHSGLSVDPPEVLYSKPFNRSSANRKLLPVIWPGETTQKPRGWVFSNNGRNLRVGVPRRVSYRPFVSQMQGTDMFKGFCIDIFLAAVNLLPYAVPYKFIPFGDGRSNPSNTELVRLITAGVFDAAVGDITITKERTMMVDFTQPYIESGLVVVAPVKKVESNAWAFLRPFTPMMWGVTAILFLAVGFVVWILEHRLNDDFRGPPKKQVVTILWFSFSTMFFSHRENTVSTLGRFVVLIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIESLVKSKEPIGYLQGSFTGDYLVEEVGIHESRLVPLKTGDETAKALKAGPNKGGIAAYVDERAYIELFLSSRCDFTIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLNSACLAQGAKLEVDRLDFKSFWGLYLVCGLACLLALLIHLIQMMRQYTKHYSNETESSGQSSMSTRLRTFLTFVDEKEEEVKHRSKRSSSTVGGSLSSSTIYSSNKDYTQSSSNKSIDCAYDA 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0256 929 Pfam Receptor family ligand binding region 49 403 IPR001828 -
Lele55g0256 929 FunFam Glutamate receptor 141 292 - -
Lele55g0256 929 MobiDBLite consensus disorder prediction 887 929 - -
Lele55g0256 929 Gene3D - 576 696 - -
Lele55g0256 929 FunFam Glutamate receptor 576 706 - -
Lele55g0256 929 SUPERFAMILY Periplasmic binding protein-like I 27 456 IPR028082 -
Lele55g0256 929 PIRSF IGluLR_plant 1 926 IPR017103 -
Lele55g0256 929 Gene3D - 734 774 - -
Lele55g0256 929 SMART AABind_6 464 808 IPR001638 -
Lele55g0256 929 MobiDBLite consensus disorder prediction 894 929 - -
Lele55g0256 929 FunFam Glutamate receptor 460 576 - -
Lele55g0256 929 SMART GluR_14 466 807 IPR001320 GO:0015276|GO:0016020
Lele55g0256 929 CDD PBP1_GABAb_receptor_plant 33 422 IPR044440 -
Lele55g0256 929 Gene3D - 456 575 - -
Lele55g0256 929 Gene3D - 50 393 - -
Lele55g0256 929 Gene3D - 141 418 - -
Lele55g0256 929 FunFam Glutamate receptor 702 809 - -
Lele55g0256 929 Gene3D - 775 805 - -
Lele55g0256 929 CDD GluR_Plant 465 805 - -
Lele55g0256 929 Pfam Ligand-gated ion channel 806 838 IPR001320 GO:0015276|GO:0016020
Lele55g0256 929 Pfam Bacterial extracellular solute-binding proteins, family 3 466 805 IPR001638 -
Lele55g0256 929 SUPERFAMILY Periplasmic binding protein-like II 440 807 - -
Lele55g0256 929 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0256 Lele-ChrLele55 1549484 1553330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0256 5 893 Ion Channels AT3G51480 58.129 0.0 1113