Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0240 ATGACTTCACAGCGCTCGTATATTGACCACGTCACAACGATGGAGAAGGCAGATTCTGGACAGAAGCTATACACGCTAATGCGACTTTGGGAGTTCCCAGATCAGTATGTCATTGAGCCCACGGATGGCTCTTCTGGTTCTTCTTTGACAGTGAGTCGAGTGGATGGCTCGATGAAGCTTATTGATGCGATTCCAGAATGCAACAAGCTTCGAGTACCTAAGATTTGGACAGTTTTCGGTGTGGTTGGGATGATAAGGCTTTTGGCTGGATCATATTTGCTGGTTATAACTGATCGTGAATGTGTTGGATCTTACTTGGGTTATCCAATTTACAAAGTTTCATCTATGAAGGTTTTTCCATGCGATCATTCTCTTAATAATACCAATGCTGAACAGAAAAAGACAGAGTTGGAGTTTTCTAAGCTTCTAAACATTGCAGAGAAAACGTCTGGTCTGTTCTTCTCATATGACACCAACTTAACACTGGGTGCCCAGCGATTGAATGACCTTGGTGATGAATCTAGATTGCTTCCTCTTTGGAGACAGTCTGAGCCCCGATTTCTATGGAACAATTATTTGTTGGAAGTGCTCATTGATAACAAGCTTGATCCATTCTTACTCCCTGTGGTACAAGGAAGTTTTCATTACTTTCAAGCAGCCATTGGAAAGGATATTATTGATGTCACTTTGATTGCCAGGAGATGCACGAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGACCCTGATGGTTATGTTGCTAATTTCGTGGAAACTGAGCAAATTATGCAGTTCAATGGGTATACAGCATCATTTGTTCAGATCCGTGGCTCAATCCCATTGGTTTGGGATCAAATTGTTGACCTGACGTATAAACCTAAGTATGAGTTATTGAGACTTGAGGAAGCTCCTCGAGTCATGGAACGGCATTTCCTAGATTTAAGGAAAAAATATGGGGCTGTCTTAGCTGTTGATCTTGTCAACAAGCATGGAGGAGAGGGTCGGCTGAATGAAAAATTTAGAAGCACAATGCAGCATTTGGCTAGTGATGATGTAAGATATCTTCACTTTGATTTTCATCATATCTGTGGGCATGTTCATTTCGAACGCCTTTCTATCCTTTATGAACAAATTTCAGATTTTCTCGAGAGAAATGGATATCTTCTATTAAATGAAAAGGGAGAGAAAATGAAGGAGCAGCTTGGAGTTGTCCGAACTAATTGTATTGATTGTCTGGATCGTACAAATGTAACTCAGAGCATGATTGGCCGAAATATGTTGGAATTCCAGCTTAGAAGGCTCGGGGTATTTGAGGCTGAAGAAACCATTACTTCACATCCAAATCTAGACGAAAACTTCAAGATCATGTGGGCTAATCATGGGGATGATATAAGCACCCAATATTCAGGCACGCCTGCTCTAAAAGGAGACTTTGTCAGATATGGGCACCGTACAATGCAAGGAATACTAAAAGATGGATGTAGTGCTCTTATGCGCTATTATTTAAATAATTTTTGTGACGGAACAAAGCAGGATGCAATTGATCTCCTGCAAGGACATTACATAGTTTCTGTCAGCAGAGATATGACTACCTCTTCTCAGAAAGGAGGAATCGAAGCTATAGCTTCCTTTCCTCTGGCTTTTTCTCTGGTTATGATTGGATTCGTCTTTGCAACCATGTCATTGAGGGAAGTTCGATACGATTTCCGGCATTTCTTTTTCTCTCTGATGTGGGCAAGCATTAGTATGGCAATAGCTGCATTTGTGAGGGCAAATGGTCGGGTTTTCTGCAACAGACCTCGCCTACACAAGCCACGGCGTTGA 1827 0.4171 MTSQRSYIDHVTTMEKADSGQKLYTLMRLWEFPDQYVIEPTDGSSGSSLTVSRVDGSMKLIDAIPECNKLRVPKIWTVFGVVGMIRLLAGSYLLVITDRECVGSYLGYPIYKVSSMKVFPCDHSLNNTNAEQKKTELEFSKLLNIAEKTSGLFFSYDTNLTLGAQRLNDLGDESRLLPLWRQSEPRFLWNNYLLEVLIDNKLDPFLLPVVQGSFHYFQAAIGKDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQFNGYTASFVQIRGSIPLVWDQIVDLTYKPKYELLRLEEAPRVMERHFLDLRKKYGAVLAVDLVNKHGGEGRLNEKFRSTMQHLASDDVRYLHFDFHHICGHVHFERLSILYEQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEFQLRRLGVFEAEETITSHPNLDENFKIMWANHGDDISTQYSGTPALKGDFVRYGHRTMQGILKDGCSALMRYYLNNFCDGTKQDAIDLLQGHYIVSVSRDMTTSSQKGGIEAIASFPLAFSLVMIGFVFATMSLREVRYDFRHFFFSLMWASISMAIAAFVRANGRVFCNRPRLHKPRR 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0240 608 ProSiteProfiles Sac phosphatase domain profile. 143 471 IPR002013 GO:0016791
Lele55g0240 608 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 22 605 - -
Lele55g0240 608 Pfam SacI homology domain 79 364 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0240 Lele-ChrLele55 1472797 1482900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0240 22 607 Acyl Lipid Metabolism Gene Families AT5G66020 74.446 0.0 967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0035 52 230511 235921 Lele55g0240 55 1472797 1482900 CCT
Lele55g0240 55 1472797 1482900 Lele55g0240 55 1472797 1482900 ECH
Lele53g1245 53 21071885 21082330 Lele55g0240 55 1472797 1482900 hybridization
Lele54g1217 54 17689775 17699069 Lele55g0240 55 1472797 1482900 hybridization