Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0219 ATGGCCACGACGTCGTATAGTATCTCCGGCTTCCTTCTCTCCCCTTCTCTCTGCTCCCCCAAACTGGATCATCATCCAAGAATTTCATTTGTGAAACCGCTGAACTCTCGTCAGGCACGGAGCGTTAGTGTTGTTAAATCCAACTTTCCAGACTACTGGTCTACTCTGGACGGGAATTTGGAGACCGTCGGAGGTCCGACGTCTGTGCCGGTGCGCGTAGCACACGAGCTGCTTCTTGCTGGACATCGCTTTTTGGATGTGAGAACTCCCGAAGAATTCATCGCAGGACACGCTCCAGGCGCAATTAACATACCATACATGTACAGAGTTGGATCAGGTATGACAAAGAATGCCAATTTTGTTGCAGAAGTCTCATCACGTTTTAGAAAAGATGACGAGATTATTGTTGGCTGTCAACTTGGTAAAAGGTCTATGATGGCTGCTACTGACTTATTAGCTGCTGGATTTTCTGGAATTACAGACATAGCTGGTGGATTCGCTGCTTGGACTCAAAATGGGCTTCCAACAGAACAGTGA 537 0.4749 MATTSYSISGFLLSPSLCSPKLDHHPRISFVKPLNSRQARSVSVVKSNFPDYWSTLDGNLETVGGPTSVPVRVAHELLLAGHRFLDVRTPEEFIAGHAPGAINIPYMYRVGSGMTKNANFVAEVSSRFRKDDEIIVGCQLGKRSMMAATDLLAAGFSGITDIAGGFAAWTQNGLPTEQ 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0219 178 Gene3D - 58 177 IPR036873 -
Lele55g0219 178 CDD RHOD 74 169 - -
Lele55g0219 178 Pfam Rhodanese-like domain 83 171 IPR001763 -
Lele55g0219 178 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 64 177 IPR036873 -
Lele55g0219 178 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 8 177 - -
Lele55g0219 178 SMART rhod_4 68 175 IPR001763 -
Lele55g0219 178 ProSiteProfiles Rhodanese domain profile. 78 178 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0219 Lele-ChrLele55 1360649 1362434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0219 68 175 Sulfurtransferasese or Rhodanese AT5G66170 45.455 1.82e-30 106